RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 RBX1P62877 108 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 Q6ZN92 141 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
TDP1-211ENST00000555178 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 KLK5Q9Y337 293 aaPredicted RBP7.33□□□□□ -1.24
TDP1-211ENST00000555178 PYGO1Q9Y3Y4 419 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 PRSS29PA6NIE9 313 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 G0S2P27469 103 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 DNAH10Q8IVF4 4471 aa7.33□□□□□ -1.24
TDP1-211ENST00000555178 IGHV3-30P01768 117 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 IGHV3-33P01772 117 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 IGHV3-30-3P0DP02 117 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 IGHV3-30-5P0DP03 117 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 TIRAPP58753 221 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 ODF1Q14990 250 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 OR5A1Q8NGJ0 315 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 CDC42SE2Q9NRR3 84 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 ALMS1Q8TCU4 4167 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 IGKV3OR2-268A0A0C4DH90 116 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 TIMM21Q9BVV7 248 aa7.32□□□□□ -1.24
TDP1-211ENST00000555178 AMELXQ99217 191 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 MRPL35Q9NZE8 188 aaKnown RBP7.31□□□□□ -1.24
TDP1-211ENST00000555178 A0A087WX48 190 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 TRAV8-6A0A0B4J262 113 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 H7C423 109 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
TDP1-211ENST00000555178 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 VCX2Q9H322 139 aa7.31□□□□□ -1.24
TDP1-211ENST00000555178 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
TDP1-211ENST00000555178 PMVKQ15126 192 aa7.3□□□□□ -1.24
TDP1-211ENST00000555178 MAJINQ3KP22 176 aa7.3□□□□□ -1.24
TDP1-211ENST00000555178 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
TDP1-211ENST00000555178 TEX43Q6ZNM6 134 aa7.3□□□□□ -1.24
TDP1-211ENST00000555178 TMEM101Q96IK0 257 aa7.3□□□□□ -1.24
TDP1-211ENST00000555178 KRTAP1-5Q9BYS1 174 aa7.3□□□□□ -1.24
TDP1-211ENST00000555178 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
TDP1-211ENST00000555178 IGLV4-69A0A075B6H9 119 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 TRAV13-1A0A0B4J241 112 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 LINC01549A6NIU2 74 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 C3orf84H3BNL1 204 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
TDP1-211ENST00000555178 ZNF25P17030 456 aaPredicted RBP7.29□□□□□ -1.24
TDP1-211ENST00000555178 CCL18P55774 89 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 MRPS16Q9Y3D3 137 aaKnown RBP7.29□□□□□ -1.24
TDP1-211ENST00000555178 A0A1B0GUV1 79 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 TCTAP57738 103 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 LINC00269Q8N2A0 174 aa7.29□□□□□ -1.24
TDP1-211ENST00000555178 CHTOPQ9Y3Y2 248 aaKnown RBP7.29□□□□□ -1.24
TDP1-211ENST00000555178 KMT2CQ8NEZ4 4911 aaKnown RBP7.28□□□□□ -1.24
TDP1-211ENST00000555178 TRAV12-1A0A0B4J245 112 aa7.28□□□□□ -1.24
TDP1-211ENST00000555178 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
TDP1-211ENST00000555178 LGALS9CQ6DKI2 356 aa7.28□□□□□ -1.24
TDP1-211ENST00000555178 KLK12Q9UKR0 248 aa7.28□□□□□ -1.24
TDP1-211ENST00000555178 SACSQ9NZJ4 4579 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 C11orf86A6NJI1 115 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 F8VRH5 84 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 UBE2D1P51668 147 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 UBE2DNLQ8IWF7 75 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 IGLV10-54A0A075B6I4 117 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 hDV102S1A0JD36 115 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 NPSP0C0P6 89 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 COX6A2Q02221 97 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 Q9H8V8 135 aa7.27□□□□□ -1.25
TDP1-211ENST00000555178 SIVA1O15304 175 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 LY6G6CO95867 125 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 REG3AQ06141 175 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 LINC01556Q5JQF7 62 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 CHAC1Q9BUX1 264 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 DNAH2Q9P225 4427 aa7.26□□□□□ -1.25
TDP1-211ENST00000555178 C20orf202A1L168 122 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 IGKCP01834 107 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 DNAH10OSP0CZ25 163 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 SMAGPQ0VAQ4 97 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 LINC00242Q5T6M2 205 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 ENHOQ6UWT2 76 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 STPG4Q8N801 248 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 LINC00959A0A1B0GUT2 108 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 M0R2N4 97 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 DPM2O94777 84 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 SMIM6P0DI80 62 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 UBE2WQ96B02 151 aa7.25□□□□□ -1.25
TDP1-211ENST00000555178 IGLC3P0DOY3 106 aa7.24□□□□□ -1.25
TDP1-211ENST00000555178 C12orf57Q99622 126 aa7.24□□□□□ -1.25
TDP1-211ENST00000555178 XCL1P47992 114 aa7.24□□□□□ -1.25
TDP1-211ENST00000555178 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
TDP1-211ENST00000555178 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
TDP1-211ENST00000555178 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
TDP1-211ENST00000555178 PKIAP61925 76 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms