RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CACFD1Q9UGQ2 172 aa1.93□□□□□ -2.1
VRK1-203ENST00000555067 R4GMQ9 66 aa1.93□□□□□ -2.1
VRK1-203ENST00000555067 TRGV1A0A0A0MS02 117 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 LY6G6CO95867 125 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 GYPAP02724 150 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 COX6CP09669 75 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 TRAPPC2P0DI81 140 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 TRAPPC2BP0DI82 140 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 TRGV9Q99603 122 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 C20orf78Q9BR46 151 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 DIP2CQ9Y2E4 1556 aa1.92□□□□□ -2.1
VRK1-203ENST00000555067 EHBP1L1Q8N3D4 1523 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 RGPD4Q7Z3J3 1758 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 LOC285095A0A1B0GVY8 99 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 SYS1-DBNDD2H3BUS1 97 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 K7EP34 96 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 IFT172Q9UG01 1749 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 ZDBF2Q9HCK1 2354 aa1.91□□□□□ -2.1
VRK1-203ENST00000555067 SCN7AQ01118 1682 aa1.9□□□□□ -2.1
VRK1-203ENST00000555067 F5P12259 2224 aa1.9□□□□□ -2.1
VRK1-203ENST00000555067 ARHGAP35Q9NRY4 1499 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 TRAV1-2A0A0B4J238 106 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 IGLC7A0M8Q6 106 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 H7BZZ5 65 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 M0R135 149 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 PRB1P04280 392 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 ACYP2P14621 99 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 TMEM170BQ5T4T1 132 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 VMO1Q7Z5L0 202 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 BAGE3Q86Y29 109 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 LCN9Q8WX39 176 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 HMGXB3Q12766 1538 aa1.9□□□□□ -2.11
VRK1-203ENST00000555067 TMEM14DPA8MWL7 114 aa1.89□□□□□ -2.11
VRK1-203ENST00000555067 C10orf142B7Z368 130 aa1.89□□□□□ -2.11
VRK1-203ENST00000555067 F8VRH5 84 aa1.89□□□□□ -2.11
VRK1-203ENST00000555067 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
VRK1-203ENST00000555067 AMELXQ99217 191 aa1.89□□□□□ -2.11
VRK1-203ENST00000555067 ZNF236Q9UL36 1845 aa1.89□□□□□ -2.11
VRK1-203ENST00000555067 ERICH3Q5RHP9 1530 aa1.88□□□□□ -2.11
VRK1-203ENST00000555067 ZMYM4Q5VZL5 1548 aa1.88□□□□□ -2.11
VRK1-203ENST00000555067 CLTCQ00610 1675 aaKnown RBP1.88□□□□□ -2.11
VRK1-203ENST00000555067 NMBP08949 121 aa1.88□□□□□ -2.11
VRK1-203ENST00000555067 C6orf52Q5T4I8 152 aa1.88□□□□□ -2.11
VRK1-203ENST00000555067 ARL2-SNX15V9GYD0 113 aa1.88□□□□□ -2.11
VRK1-203ENST00000555067 CEP162Q5TB80 1403 aa1.88□□□□□ -2.11
VRK1-203ENST00000555067 RGPD3A6NKT7 1758 aaPredicted RBP1.87□□□□□ -2.11
VRK1-203ENST00000555067 CDK13Q14004 1512 aaKnown RBP1.87□□□□□ -2.11
VRK1-203ENST00000555067 A0A096LNT2 108 aa1.87□□□□□ -2.11
VRK1-203ENST00000555067 CTXND1A0A1B0GTU2 59 aa1.87□□□□□ -2.11
VRK1-203ENST00000555067 ZNF137PP52743 207 aa1.87□□□□□ -2.11
VRK1-203ENST00000555067 CNTRLQ7Z7A1 2325 aa1.87□□□□□ -2.11
VRK1-203ENST00000555067 FAM223AQ8IWN6 122 aa1.87□□□□□ -2.11
VRK1-203ENST00000555067 NXT2Q9NPJ8 142 aaKnown RBP1.87□□□□□ -2.11
VRK1-203ENST00000555067 KIF21AQ7Z4S6 1674 aa1.86□□□□□ -2.11
VRK1-203ENST00000555067 RP1L1Q8IWN7 2480 aaPredicted RBP1.86□□□□□ -2.11
VRK1-203ENST00000555067 SPINK13Q1W4C9 94 aa1.86□□□□□ -2.11
VRK1-203ENST00000555067 Q6ZSA8 131 aa1.86□□□□□ -2.11
VRK1-203ENST00000555067 KNTC1P50748 2209 aa1.86□□□□□ -2.11
VRK1-203ENST00000555067 PPLO60437 1756 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 WNK3Q9BYP7 1800 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 CYB5AP00167 134 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 PEA15Q15121 130 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 BAGE2Q86Y30 109 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 LINC01558Q9Y6Z2 57 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 UNC13BO14795 1591 aa1.85□□□□□ -2.11
VRK1-203ENST00000555067 NRXN1Q9ULB1 1477 aa1.84□□□□□ -2.11
VRK1-203ENST00000555067 FAM223BA6NKX1 122 aa1.84□□□□□ -2.11
VRK1-203ENST00000555067 UQCR11O14957 56 aa1.84□□□□□ -2.11
VRK1-203ENST00000555067 RPL37P61927 97 aaKnown RBP1.84□□□□□ -2.11
VRK1-203ENST00000555067 TDRG1Q3Y452 100 aa1.84□□□□□ -2.11
VRK1-203ENST00000555067 S100A16Q96FQ6 103 aaKnown RBP1.84□□□□□ -2.11
VRK1-203ENST00000555067 COL6A6A6NMZ7 2263 aa1.84□□□□□ -2.12
VRK1-203ENST00000555067 MYO7BQ6PIF6 2116 aa1.84□□□□□ -2.12
VRK1-203ENST00000555067 UACAQ9BZF9 1416 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 MYO7AQ13402 2215 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 FANCAO15360 1455 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 ATP10BO94823 1461 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 TRBV25-1A0A075B6N4 114 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 F2Z2F3 143 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 PMCHL1Q16048 86 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 HIGD1BQ9P298 99 aa1.83□□□□□ -2.12
VRK1-203ENST00000555067 PDCD11Q14690 1871 aaKnown RBP1.83□□□□□ -2.12
VRK1-203ENST00000555067 EDC4Q6P2E9 1401 aaKnown RBP1.83□□□□□ -2.12
VRK1-203ENST00000555067 MAGI2Q86UL8 1455 aa1.82□□□□□ -2.12
VRK1-203ENST00000555067 BTAF1O14981 1849 aa1.82□□□□□ -2.12
VRK1-203ENST00000555067 EPRSP07814 1512 aaKnown RBP1.82□□□□□ -2.12
VRK1-203ENST00000555067 SSC5DA1L4H1 1573 aa1.82□□□□□ -2.12
VRK1-203ENST00000555067 MYO3AQ8NEV4 1616 aa1.82□□□□□ -2.12
VRK1-203ENST00000555067 GVQW2A0A096LPI5 108 aaPredicted RBP1.82□□□□□ -2.12
VRK1-203ENST00000555067 ANGP03950 147 aaKnown RBP1.82□□□□□ -2.12
VRK1-203ENST00000555067 SAA2P0DJI9 122 aaPredicted RBP1.82□□□□□ -2.12
VRK1-203ENST00000555067 CFAP126Q5VTH2 177 aa1.82□□□□□ -2.12
VRK1-203ENST00000555067 UBR1Q8IWV7 1749 aa1.81□□□□□ -2.12
VRK1-203ENST00000555067 H3BQF6 201 aa1.81□□□□□ -2.12
VRK1-203ENST00000555067 M0R3E3 92 aa1.81□□□□□ -2.12
VRK1-203ENST00000555067 SMIM11BQ8TCY0 68 aa1.81□□□□□ -2.12
VRK1-203ENST00000555067 POLA1P09884 1462 aaPredicted RBP1.81□□□□□ -2.12
VRK1-203ENST00000555067 SMIM31A0A1B0GVY4 71 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms