RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 IGLV4-60A0A075B6I1 120 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 C1orf196B1AJZ1 125 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 M0R2N4 97 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-203ENST00000554901 NFE4Q86UQ8 179 aa11.08□□□□□ -0.64
SPTLC2-203ENST00000554901 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
SPTLC2-203ENST00000554901 CRPP02741 224 aa11.07□□□□□ -0.64
SPTLC2-203ENST00000554901 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
SPTLC2-203ENST00000554901 MIAQ16674 131 aa11.06□□□□□ -0.64
SPTLC2-203ENST00000554901 LINC00269Q8N2A0 174 aa11.06□□□□□ -0.64
SPTLC2-203ENST00000554901 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
SPTLC2-203ENST00000554901 DNAH6Q9C0G6 4158 aa11.06□□□□□ -0.64
SPTLC2-203ENST00000554901 HSBP1O75506 76 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 HBDP02042 147 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 REG3AQ06141 175 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 ERASQ7Z444 233 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 RMI2Q96E14 147 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 COX11Q9Y6N1 276 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 KMT2AQ03164 3969 aa11.05□□□□□ -0.64
SPTLC2-203ENST00000554901 TRAV8-4A0A0B4J246 113 aa11.04□□□□□ -0.64
SPTLC2-203ENST00000554901 IGIPA6NJ69 53 aa11.04□□□□□ -0.64
SPTLC2-203ENST00000554901 ENHOQ6UWT2 76 aa11.04□□□□□ -0.64
SPTLC2-203ENST00000554901 A0A096LNJ9 63 aa11.04□□□□□ -0.64
SPTLC2-203ENST00000554901 SERF1AO75920 110 aa11.04□□□□□ -0.64
SPTLC2-203ENST00000554901 TMEM141Q96I45 108 aa11.04□□□□□ -0.64
SPTLC2-203ENST00000554901 CCL25O15444 150 aa11.03□□□□□ -0.64
SPTLC2-203ENST00000554901 COA6Q5JTJ3 125 aaKnown RBP11.03□□□□□ -0.64
SPTLC2-203ENST00000554901 Q6ZUT4 128 aa11.03□□□□□ -0.64
SPTLC2-203ENST00000554901 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
SPTLC2-203ENST00000554901 TM2D2Q9BX73 214 aa11.03□□□□□ -0.64
SPTLC2-203ENST00000554901 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
SPTLC2-203ENST00000554901 LINC00310P59036 64 aa11.02□□□□□ -0.65
SPTLC2-203ENST00000554901 Q6ZN92 141 aa11.02□□□□□ -0.65
SPTLC2-203ENST00000554901 FAM104AQ969W3 186 aa11.02□□□□□ -0.65
SPTLC2-203ENST00000554901 Q9HAA7 133 aa11.02□□□□□ -0.65
SPTLC2-203ENST00000554901 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
SPTLC2-203ENST00000554901 C1orf43Q9BWL3 253 aa11.01□□□□□ -0.65
SPTLC2-203ENST00000554901 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
SPTLC2-203ENST00000554901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 ATP5LO75964 103 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 PMCHL1Q16048 86 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 TEX43Q6ZNM6 134 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 Q6ZRN7 208 aaPredicted RBP10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 AMELXQ99217 191 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 VCX2Q9H322 139 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 RYR2Q92736 4967 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 SS18Q15532 418 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 OPRPNQ99935 248 aaPredicted RBP10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
SPTLC2-203ENST00000554901 IGKV2D-24A0A075B6R9 120 aa10.98□□□□□ -0.65
SPTLC2-203ENST00000554901 HYDINQ4G0P3 5121 aa10.98□□□□□ -0.65
SPTLC2-203ENST00000554901 IGKV3OR2-268A0A0C4DH90 116 aa10.97□□□□□ -0.65
SPTLC2-203ENST00000554901 IFITM10A6NMD0 228 aa10.97□□□□□ -0.65
SPTLC2-203ENST00000554901 NUPR1O60356 82 aa10.97□□□□□ -0.65
SPTLC2-203ENST00000554901 RNASE13Q5GAN3 156 aaKnown RBP10.97□□□□□ -0.65
SPTLC2-203ENST00000554901 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
SPTLC2-203ENST00000554901 RTL8CO15255 209 aa10.96□□□□□ -0.65
SPTLC2-203ENST00000554901 PSCAO43653 123 aa10.96□□□□□ -0.65
SPTLC2-203ENST00000554901 NDUFA6P56556 154 aa10.96□□□□□ -0.65
SPTLC2-203ENST00000554901 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
SPTLC2-203ENST00000554901 LEPROTL1O95214 131 aa10.95□□□□□ -0.66
SPTLC2-203ENST00000554901 KRTAP26-1Q6PEX3 210 aa10.95□□□□□ -0.66
SPTLC2-203ENST00000554901 LINC00173Q6ZV60 143 aa10.95□□□□□ -0.66
SPTLC2-203ENST00000554901 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-203ENST00000554901 PACRGQ96M98 296 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-203ENST00000554901 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 TRAV13-1A0A0B4J241 112 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 PMVKQ15126 192 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 BAALCQ8WXS3 180 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 HSPB8Q9UJY1 196 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 UBE2D1P51668 147 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 CD164L2Q6UWJ8 174 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
SPTLC2-203ENST00000554901 SEC11AP67812 179 aa10.93□□□□□ -0.66
SPTLC2-203ENST00000554901 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
SPTLC2-203ENST00000554901 LINC00518Q8N0U6 118 aa10.93□□□□□ -0.66
SPTLC2-203ENST00000554901 CST9LQ9H4G1 147 aa10.93□□□□□ -0.66
SPTLC2-203ENST00000554901 S100A6P06703 90 aa10.92□□□□□ -0.66
SPTLC2-203ENST00000554901 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
SPTLC2-203ENST00000554901 XCL1P47992 114 aa10.91□□□□□ -0.66
SPTLC2-203ENST00000554901 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.66
SPTLC2-203ENST00000554901 FOXI1Q12951 378 aa10.9□□□□□ -0.66
SPTLC2-203ENST00000554901 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.66
SPTLC2-203ENST00000554901 MAPKAPK5-AS1Q8N8E1 139 aa10.9□□□□□ -0.66
SPTLC2-203ENST00000554901 RYR3Q15413 4870 aa10.9□□□□□ -0.66
SPTLC2-203ENST00000554901 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 PRSS1P07477 247 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 S100A12P80511 92 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 ZC2HC1BQ5TFG8 222 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 IGHV3OR16-9A0A0B4J2B5 98 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 FABP4P15090 132 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 HERVK_113P63121 156 aa10.89□□□□□ -0.67
SPTLC2-203ENST00000554901 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms