RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ZNF462Q96JM2 2506 aa12.39□□□□□ -0.43
PPP4R3A-202ENST00000554390 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
PPP4R3A-202ENST00000554390 DAND5Q8N907 189 aa12.39□□□□□ -0.43
PPP4R3A-202ENST00000554390 C3orf22Q8N5N4 141 aa12.39□□□□□ -0.43
PPP4R3A-202ENST00000554390 A0A0U1RRA0 63 aa12.38□□□□□ -0.43
PPP4R3A-202ENST00000554390 A6NDX4 124 aa12.38□□□□□ -0.43
PPP4R3A-202ENST00000554390 ACYP1P07311 99 aa12.38□□□□□ -0.43
PPP4R3A-202ENST00000554390 NDUFA7O95182 113 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 C18orf65Q6ZTR6 163 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 USMG5Q96IX5 58 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 CCL19Q99731 98 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 MTORP42345 2549 aa12.37□□□□□ -0.43
PPP4R3A-202ENST00000554390 DNAJC30Q96LL9 226 aa12.36□□□□□ -0.43
PPP4R3A-202ENST00000554390 FN1P02751 2386 aaKnown RBP12.36□□□□□ -0.43
PPP4R3A-202ENST00000554390 LOC107984640A0A0U1RRK4 108 aa12.36□□□□□ -0.43
PPP4R3A-202ENST00000554390 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
PPP4R3A-202ENST00000554390 UQCRQO14949 82 aa12.35□□□□□ -0.43
PPP4R3A-202ENST00000554390 DEFB112Q30KQ8 113 aa12.35□□□□□ -0.43
PPP4R3A-202ENST00000554390 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3A-202ENST00000554390 PYGO1Q9Y3Y4 419 aa12.35□□□□□ -0.43
PPP4R3A-202ENST00000554390 HERVK_113P63121 156 aa12.34□□□□□ -0.43
PPP4R3A-202ENST00000554390 LINC00643Q86TS7 51 aa12.34□□□□□ -0.43
PPP4R3A-202ENST00000554390 KLK5Q9Y337 293 aaPredicted RBP12.34□□□□□ -0.43
PPP4R3A-202ENST00000554390 IGLV1-40P01703 118 aa12.34□□□□□ -0.43
PPP4R3A-202ENST00000554390 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.33□□□□□ -0.43
PPP4R3A-202ENST00000554390 IGKV2-29A2NJV5 120 aaPredicted RBP12.33□□□□□ -0.43
PPP4R3A-202ENST00000554390 CSDC2Q9Y534 153 aaKnown RBP12.33□□□□□ -0.43
PPP4R3A-202ENST00000554390 ACANP16112 2415 aa12.33□□□□□ -0.44
PPP4R3A-202ENST00000554390 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
PPP4R3A-202ENST00000554390 NBPF19A0A087WUL8 3843 aa12.33□□□□□ -0.44
PPP4R3A-202ENST00000554390 Q6ZSN1 163 aa12.33□□□□□ -0.44
PPP4R3A-202ENST00000554390 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
PPP4R3A-202ENST00000554390 MSMBP08118 114 aa12.32□□□□□ -0.44
PPP4R3A-202ENST00000554390 C10orf105Q8TEF2 133 aa12.32□□□□□ -0.44
PPP4R3A-202ENST00000554390 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
PPP4R3A-202ENST00000554390 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
PPP4R3A-202ENST00000554390 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
PPP4R3A-202ENST00000554390 DAZ2Q13117 558 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 DAZ4Q86SG3 579 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 DAZ3Q9NR90 486 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 SETXQ7Z333 2677 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 COX7A2LO14548 114 aa12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 TIMM17BO60830 172 aa12.3□□□□□ -0.44
PPP4R3A-202ENST00000554390 H3BUA1 57 aa12.29□□□□□ -0.44
PPP4R3A-202ENST00000554390 SLURP1P55000 103 aa12.29□□□□□ -0.44
PPP4R3A-202ENST00000554390 DEFB131AP59861 70 aa12.29□□□□□ -0.44
PPP4R3A-202ENST00000554390 KHDC1LQ5JSQ8 128 aa12.29□□□□□ -0.44
PPP4R3A-202ENST00000554390 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
PPP4R3A-202ENST00000554390 PSMB8P28062 276 aa12.29□□□□□ -0.44
PPP4R3A-202ENST00000554390 C11orf44Q8N8P7 122 aa12.27□□□□□ -0.44
PPP4R3A-202ENST00000554390 K7EQG2 157 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 HOXD3P31249 432 aaPredicted RBP12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 CFHR3Q02985 330 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 SDIM1Q6ZPB5 146 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 Q8N2B8 174 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 LINC00308Q8TCZ7 52 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 ATP5G1P05496 136 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 CDKN2A-AS1Q9UH64 79 aa12.27□□□□□ -0.45
PPP4R3A-202ENST00000554390 BAALC-AS2P0C853 105 aa12.26□□□□□ -0.45
PPP4R3A-202ENST00000554390 COX7CP15954 63 aa12.26□□□□□ -0.45
PPP4R3A-202ENST00000554390 C5orf38Q86SI9 138 aa12.26□□□□□ -0.45
PPP4R3A-202ENST00000554390 CIRBPQ14011 172 aaKnown RBP12.26□□□□□ -0.45
PPP4R3A-202ENST00000554390 UBE2D4Q9Y2X8 147 aa12.26□□□□□ -0.45
PPP4R3A-202ENST00000554390 J3KT08 172 aa12.25□□□□□ -0.45
PPP4R3A-202ENST00000554390 NDUFA1O15239 70 aa12.25□□□□□ -0.45
PPP4R3A-202ENST00000554390 FAM19A5Q7Z5A7 132 aaPredicted RBP12.25□□□□□ -0.45
PPP4R3A-202ENST00000554390 PEMTQ9UBM1 199 aa12.25□□□□□ -0.45
PPP4R3A-202ENST00000554390 CXCL5P42830 114 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 TIRAPP58753 221 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 LRRC75A-AS1Q8N1F1 130 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 CHCHD7Q9BUK0 85 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 EDA2RQ9HAV5 297 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 BEAN1Q3B7T3 259 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 C2orf48Q96LS8 159 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 C5orf47Q569G3 176 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
PPP4R3A-202ENST00000554390 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
PPP4R3A-202ENST00000554390 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.23□□□□□ -0.45
PPP4R3A-202ENST00000554390 Q9H8V8 135 aa12.23□□□□□ -0.45
PPP4R3A-202ENST00000554390 K7EMT4 169 aa12.22□□□□□ -0.45
PPP4R3A-202ENST00000554390 A0A1B0GX51 115 aa12.22□□□□□ -0.45
PPP4R3A-202ENST00000554390 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
PPP4R3A-202ENST00000554390 TRACP01848 142 aa12.22□□□□□ -0.45
PPP4R3A-202ENST00000554390 SOSTDC1Q6X4U4 206 aa12.22□□□□□ -0.45
PPP4R3A-202ENST00000554390 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
PPP4R3A-202ENST00000554390 IGHV3-53P01767 116 aa12.21□□□□□ -0.45
PPP4R3A-202ENST00000554390 FAM218AQ96MZ4 157 aa12.21□□□□□ -0.45
PPP4R3A-202ENST00000554390 GCN1Q92616 2671 aaKnown RBP12.21□□□□□ -0.45
PPP4R3A-202ENST00000554390 hADV29S1A0JD25 119 aa12.21□□□□□ -0.46
PPP4R3A-202ENST00000554390 CRYGAP11844 174 aa12.21□□□□□ -0.46
PPP4R3A-202ENST00000554390 UBE2E2Q96LR5 201 aa12.2□□□□□ -0.46
PPP4R3A-202ENST00000554390 COX6A2Q02221 97 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms