RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SLC7A5P1Q8MH63 180 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 GNB1LQ9BYB4 327 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 TRAV8-4A0A0B4J246 113 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 PRSS47A8MTI9 375 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 H7C423 109 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 VCYO14598 125 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 CKS2P33552 79 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 SMAGPQ0VAQ4 97 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 MRPL51Q4U2R6 128 aaKnown RBP4.28□□□□□ -1.72
SLIRP-203ENST00000554074 AMN1Q8IY45 258 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 ORMDL3Q8N138 153 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 C9orf163Q8N9P6 203 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 ST20Q9HBF5 79 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 SMCO4Q9NRQ5 59 aa4.28□□□□□ -1.72
SLIRP-203ENST00000554074 TRBV27A0A0K0K1C4 114 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 SDHAF1A6NFY7 115 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 I3L3M4 83 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 K7EMI3 77 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 OXTP01178 125 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 PRSS1P07477 247 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 POLR2KP53803 58 aaKnown RBP4.27□□□□□ -1.73
SLIRP-203ENST00000554074 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
SLIRP-203ENST00000554074 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
SLIRP-203ENST00000554074 GAGE6Q13070 117 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 COTL1Q14019 142 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 TMEM136Q6ZRR5 245 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 LINC00269Q8N2A0 174 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 KIR2DL4Q99706 377 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 TMEM243Q9BU79 118 aa4.27□□□□□ -1.73
SLIRP-203ENST00000554074 TRAV26-2A0A0B4J265 109 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 APCSP02743 223 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 PMCHP20382 165 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 S100A1P23297 94 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 G0S2P27469 103 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 REG3AQ06141 175 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 CIRBPQ14011 172 aaKnown RBP4.26□□□□□ -1.73
SLIRP-203ENST00000554074 NRACQ8N912 160 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
SLIRP-203ENST00000554074 LINC01549A6NIU2 74 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 D6R8Y8 96 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 TNFRSF6BO95407 300 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 CLPSL2Q6UWE3 100 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 SDIM1Q6ZPB5 146 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 RPL39LQ96EH5 51 aaKnown RBP4.25□□□□□ -1.73
SLIRP-203ENST00000554074 PRELID3AQ96N28 172 aa4.25□□□□□ -1.73
SLIRP-203ENST00000554074 NXT2Q9NPJ8 142 aaKnown RBP4.25□□□□□ -1.73
SLIRP-203ENST00000554074 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 IGLV10-54A0A075B6I4 117 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.24□□□□□ -1.73
SLIRP-203ENST00000554074 UBE2L6O14933 153 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
SLIRP-203ENST00000554074 FCER1GP30273 86 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 RPS10P46783 165 aaKnown RBP4.24□□□□□ -1.73
SLIRP-203ENST00000554074 AMTP48728 403 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 RPL37AP61513 92 aaKnown RBP4.24□□□□□ -1.73
SLIRP-203ENST00000554074 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 MAP1LC3AQ9H492 121 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 AP5S1Q9NUS5 200 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 TRAPPC1Q9Y5R8 145 aa4.24□□□□□ -1.73
SLIRP-203ENST00000554074 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.24□□□□□ -1.73
SLIRP-203ENST00000554074 IGHV3-64A0A075B6Q5 118 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 TGIF2-C20orf24A0A0A6YYL0 155 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 hDV102S1A0JD36 115 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 NPYP01303 97 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 ESDP10768 282 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 RAB5AP20339 215 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 FABP9Q0Z7S8 132 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 ORMDL2Q53FV1 153 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
SLIRP-203ENST00000554074 Q8N8P6 123 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 TIMM21Q9BVV7 248 aa4.23□□□□□ -1.73
SLIRP-203ENST00000554074 MRPL18Q9H0U6 180 aaKnown RBP4.23□□□□□ -1.73
SLIRP-203ENST00000554074 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
SLIRP-203ENST00000554074 LINC01546A6NGU7 62 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 SMKR1H3BMG3 65 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 CCL25O15444 150 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 GAS8-AS1O95177 125 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 TSHBP01222 138 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 NPSP0C0P6 89 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 RAB5BP61020 215 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 CFAP161Q6P656 301 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 TMEM101Q96IK0 257 aa4.22□□□□□ -1.73
SLIRP-203ENST00000554074 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
SLIRP-203ENST00000554074 PANO1I0J062 215 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 SLPIP03973 132 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 Q6ZRU5 148 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 CBLN2Q8IUK8 224 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 C15orf56Q8N910 161 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 SPANXA1Q9NS26 97 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms