RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TRBV25-1A0A075B6N4 114 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 TRAV26-2A0A0B4J265 109 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 SERTM2A0A1B0GWG4 89 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 A0A1W2PPV4 95 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 IGKV2-29A2NJV5 120 aaPredicted RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 CCDC160A6NGH7 325 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 IGLC6P0CF74 106 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 TPT1P13693 172 aaKnown RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 MEF2BQ02080 365 aaPredicted RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 CNPY1Q3B7I2 92 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 C9orf116Q5BN46 136 aaPredicted RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 FAM74A1Q5RGS3 127 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 SAPCD1Q5SSQ6 148 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 RPL7L1Q6DKI1 246 aaKnown RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 Q6ZRP5 223 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 ZFP82Q8N141 532 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 ZNF664Q8N3J9 261 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 GATD1Q8NB37 220 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 SCGB1C1Q8TD33 95 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 C7orf33Q8WU49 177 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 CHCHD10Q8WYQ3 142 aaPredicted RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 RPL39LQ96EH5 51 aaKnown RBP1.83□□□□□ -2.12
SLIRP-202ENST00000553981 AQP10Q96PS8 301 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 NDFIP1Q9BT67 221 aa1.83□□□□□ -2.12
SLIRP-202ENST00000553981 TRAV8-4A0A0B4J246 113 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 IGHV1-24A0A0C4DH33 117 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 FAM240BA0A1B0GVZ2 78 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 CENPXA8MT69 81 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 TSPAN13O95857 204 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 CXorf1O96002 111 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 P01737 135 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 IGLV7-43P04211 117 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 OR5AL1P0C617 328 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 SEC11BP0C7V7 166 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 CCL20P78556 96 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 PRR4Q16378 134 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 C1orf137Q5JT78 98 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 FAM162BQ5T6X4 162 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 REG3GQ6UW15 175 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 NUP35Q8NFH5 326 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 MARVELD1Q9BSK0 173 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 PSMG3Q9BT73 122 aaPredicted RBP1.82□□□□□ -2.12
SLIRP-202ENST00000553981 DPH3P1Q9H4G8 78 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 KCNIP2Q9NS61 270 aa1.82□□□□□ -2.12
SLIRP-202ENST00000553981 TRBV20OR9-2A0A075B6H5 130 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 IGLV4-69A0A075B6H9 119 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.81□□□□□ -2.12
SLIRP-202ENST00000553981 CTXND1A0A1B0GTU2 59 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 LINC00959A0A1B0GUT2 108 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 C19orf71A6NCJ1 209 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 H0Y9J4 135 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 CCL25O15444 150 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 UPK1BO75841 260 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 IFNA7P01567 189 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 MGPP08493 103 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 CXCL1P09341 107 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 ESDP10768 282 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 NTF3P20783 257 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 XCL1P47992 114 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 CYCSP99999 105 aaKnown RBP1.81□□□□□ -2.12
SLIRP-202ENST00000553981 KRTAP13-2Q52LG2 175 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 RNASE13Q5GAN3 156 aaKnown RBP1.81□□□□□ -2.12
SLIRP-202ENST00000553981 KCNIP4Q6PIL6 250 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 Q8NBF4 154 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 HIST1H2BAQ96A08 127 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 TMEM243Q9BU79 118 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 CCDC32Q9BV29 185 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 ACTR3CQ9C0K3 210 aaPredicted RBP1.81□□□□□ -2.12
SLIRP-202ENST00000553981 RNASE7Q9H1E1 156 aaKnown RBP1.81□□□□□ -2.12
SLIRP-202ENST00000553981 RPP21Q9H633 154 aaKnown RBP1.81□□□□□ -2.12
SLIRP-202ENST00000553981 TMEM167BQ9NRX6 74 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 ANAPC11Q9NYG5 84 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 TNFSF18Q9UNG2 199 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 ZFP30Q9Y2G7 519 aa1.81□□□□□ -2.12
SLIRP-202ENST00000553981 A0A1B0GV50 99 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 RAB19A4D1S5 217 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 SMLR1H3BR10 107 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 K7EQM0 130 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 NOL3O60936 208 aaKnown RBP1.8□□□□□ -2.12
SLIRP-202ENST00000553981 FGF6P10767 208 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 SERF2P84101 59 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 SYCNQ0VAF6 134 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 SS18Q15532 418 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 SPANXN1Q5VSR9 72 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 RASL11AQ6T310 242 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 LYZL1Q6UWQ5 148 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 OR5A1Q8NGJ0 315 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 FMC1Q96HJ9 113 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 PGLYRP4Q96LB8 373 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 CARD19Q96LW7 228 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 NIT2Q9NQR4 276 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 CDC42SE2Q9NRR3 84 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 ALG5Q9Y673 324 aa1.8□□□□□ -2.12
SLIRP-202ENST00000553981 IGHV1-58A0A0C4DH39 117 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 MAP1LC3B2A6NCE7 125 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 K7EN84 100 aa1.79□□□□□ -2.12
SLIRP-202ENST00000553981 MT-ND6P03923 174 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms