RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
PABPN1-203ENST00000553960 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
PABPN1-203ENST00000553960 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
PABPN1-203ENST00000553960 IGHV3-38A0A0C4DH36 116 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 C11orf86A6NJI1 115 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 DLEU1O43261 78 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 IGKCP01834 107 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 LYPD5Q6UWN5 251 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 MRPL35Q9NZE8 188 aaKnown RBP7.5□□□□□ -1.21
PABPN1-203ENST00000553960 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
PABPN1-203ENST00000553960 DNAH9Q9NYC9 4486 aa7.5□□□□□ -1.21
PABPN1-203ENST00000553960 UBE2D1P51668 147 aa7.49□□□□□ -1.21
PABPN1-203ENST00000553960 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
PABPN1-203ENST00000553960 LINC01561Q8N1V8 128 aa7.49□□□□□ -1.21
PABPN1-203ENST00000553960 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
PABPN1-203ENST00000553960 C2orf88Q9BSF0 95 aa7.49□□□□□ -1.21
PABPN1-203ENST00000553960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.48□□□□□ -1.21
PABPN1-203ENST00000553960 IGKV2-29A2NJV5 120 aaPredicted RBP7.48□□□□□ -1.21
PABPN1-203ENST00000553960 HSBP1L1C9JCN9 74 aa7.48□□□□□ -1.21
PABPN1-203ENST00000553960 UBE2L6O14933 153 aa7.48□□□□□ -1.21
PABPN1-203ENST00000553960 DGAT2L7PQ6IED9 249 aa7.48□□□□□ -1.21
PABPN1-203ENST00000553960 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
PABPN1-203ENST00000553960 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
PABPN1-203ENST00000553960 PRR34Q9NV39 138 aa7.48□□□□□ -1.21
PABPN1-203ENST00000553960 TSTD3H0UI37 97 aa7.47□□□□□ -1.21
PABPN1-203ENST00000553960 DEFA6Q01524 100 aa7.47□□□□□ -1.21
PABPN1-203ENST00000553960 TRAV8-6A0A0B4J262 113 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 A0A0J9YY99 117 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 E9PLD3 99 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 RBX1P62877 108 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 HERVK_113P63121 156 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 AMMECR1LQ6DCA0 310 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 Q6ZUT4 128 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 PMCHL2Q9BQD1 86 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
PABPN1-203ENST00000553960 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
PABPN1-203ENST00000553960 SIVA1O15304 175 aa7.45□□□□□ -1.22
PABPN1-203ENST00000553960 DNAH10OSP0CZ25 163 aa7.45□□□□□ -1.22
PABPN1-203ENST00000553960 LINC01556Q5JQF7 62 aa7.45□□□□□ -1.22
PABPN1-203ENST00000553960 MRPS16Q9Y3D3 137 aaKnown RBP7.45□□□□□ -1.22
PABPN1-203ENST00000553960 FBN3Q75N90 2809 aa7.45□□□□□ -1.22
PABPN1-203ENST00000553960 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 COX8AP10176 69 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 HTN3P15516 51 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 ESRGQ1W209 222 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 SPATA45Q537H7 98 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 ZC2HC1BQ5TFG8 222 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 OPRPNQ99935 248 aaPredicted RBP7.44□□□□□ -1.22
PABPN1-203ENST00000553960 MIEN1Q9BRT3 115 aa7.44□□□□□ -1.22
PABPN1-203ENST00000553960 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 IGHV3OR16-9A0A0B4J2B5 98 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 ZNF22P17026 224 aaPredicted RBP7.43□□□□□ -1.22
PABPN1-203ENST00000553960 CEMP1Q6PRD7 247 aaPredicted RBP7.43□□□□□ -1.22
PABPN1-203ENST00000553960 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 UQCR10Q9UDW1 63 aa7.43□□□□□ -1.22
PABPN1-203ENST00000553960 HERVK_113P61574 105 aa7.42□□□□□ -1.22
PABPN1-203ENST00000553960 GAGE6Q13070 117 aa7.42□□□□□ -1.22
PABPN1-203ENST00000553960 MPV17L2Q567V2 206 aa7.42□□□□□ -1.22
PABPN1-203ENST00000553960 PAM16Q9Y3D7 125 aa7.42□□□□□ -1.22
PABPN1-203ENST00000553960 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 LINC00959A0A1B0GUT2 108 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 H0Y8G0 127 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 H3BRM9 83 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 ATOH7Q8N100 152 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 HIGD1BQ9P298 99 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
PABPN1-203ENST00000553960 A0A087WZ39 114 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 NMUP48645 174 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 CCL18P55774 89 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 MIAQ16674 131 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 MAJINQ3KP22 176 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 SLC25A34Q6PIV7 304 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 SFTA2Q6UW10 78 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 STPG4Q8N801 248 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 DEFB104AQ8WTQ1 72 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 PLEKHB2Q96CS7 222 aa7.4□□□□□ -1.22
PABPN1-203ENST00000553960 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.22
PABPN1-203ENST00000553960 KLK5Q9Y337 293 aaPredicted RBP7.4□□□□□ -1.22
PABPN1-203ENST00000553960 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
PABPN1-203ENST00000553960 LEPROTO15243 131 aa7.39□□□□□ -1.23
PABPN1-203ENST00000553960 DDTP30046 118 aa7.39□□□□□ -1.23
PABPN1-203ENST00000553960 SS18Q15532 418 aa7.39□□□□□ -1.23
PABPN1-203ENST00000553960 CD164L2Q6UWJ8 174 aa7.39□□□□□ -1.23
PABPN1-203ENST00000553960 PPDPFQ9H3Y8 114 aa7.39□□□□□ -1.23
PABPN1-203ENST00000553960 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
PABPN1-203ENST00000553960 REG3AQ06141 175 aa7.38□□□□□ -1.23
PABPN1-203ENST00000553960 C10orf126Q8N4M7 172 aa7.38□□□□□ -1.23
PABPN1-203ENST00000553960 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
PABPN1-203ENST00000553960 DYNC2H1Q8NCM8 4307 aaKnown RBP7.38□□□□□ -1.23
PABPN1-203ENST00000553960 IGKV2D-26A0A0A0MRZ7 120 aa7.37□□□□□ -1.23
PABPN1-203ENST00000553960 COX6A2Q02221 97 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms