RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 DEFB104AQ8WTQ1 72 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TMEM263Q8WUH6 116 aaKnown RBP3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 RAB37Q96AX2 223 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 PLEKHB2Q96CS7 222 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SCGB3A2Q96PL1 93 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TRGV9Q99603 122 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 UPK3BQ9BT76 320 aa3.79□□□□□ -1.8
SMARCE1P3-201ENST00000553649 TRGV2A0A075B6R0 118 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 IGKV1OR2-108A0A075B7D4 117 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 A0A096LPF7 62 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CRYM-AS1A6NIL9 109 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 H3BUT2 72 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 SNCGO76070 127 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 NXPH4O95158 308 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 NDUFC2O95298 119 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MT-ND6P03923 174 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 CD164Q04900 197 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 C4orf26Q17RF5 130 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LRRC37A5PQ49AS3 106 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 LINC01620Q4KN68 170 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 ZNF493Q6ZR52 646 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 C2orf50Q96LR7 162 aa3.78□□□□□ -1.8
SMARCE1P3-201ENST00000553649 A0A087WTM6 91 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SNURFLB1AK76 121 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 H3BP45 60 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 H3BTX0 84 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 MPDU1O75352 247 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 DPM2O94777 84 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 IGLC6P0CF74 106 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SMIM13P0DJ93 91 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 Q6ZTI0 123 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 BPIFA4PQ86YQ2 179 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 PPDPFLQ8WWR9 84 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 RASL10AQ92737 203 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 KCNS1Q96KK3 526 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 KIR2DL4Q99706 377 aa3.77□□□□□ -1.81
SMARCE1P3-201ENST00000553649 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 TRAV12-3A0A0B4J271 114 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 PRAC2D3DTV9 90 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 H3BRN7 92 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SYS1-DBNDD2H3BUS1 97 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 UQCRQO14949 82 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SERF1AO75920 110 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 APOMO95445 188 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 IGHV3-53P01767 116 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SLC25A5P05141 298 aaKnown RBP3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 C3orf79P0CE67 100 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LEPP41159 167 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SPANXN5Q5MJ07 72 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 FAM231DQ6ZW35 169 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 ATOH7Q8N100 152 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LINC00612Q8N6U2 182 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 RPL36ALQ969Q0 106 aaKnown RBP3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 VSIG2Q96IQ7 327 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LINC00477Q96M19 166 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SHANK2-AS3Q9BTD1 123 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 MSRB1Q9NZV6 116 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
SMARCE1P3-201ENST00000553649 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 PMS2P5A8MQ11 134 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 H3BNG1 76 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 NUPR1O60356 82 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 ZNF324O75467 553 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 RPL13AP40429 203 aaKnown RBP3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 TMEM258P61165 79 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 IL15RAQ13261 267 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 IBA57Q5T440 356 aaKnown RBP3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 TMEM136Q6ZRR5 245 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 NFE4Q86UQ8 179 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 C10orf126Q8N4M7 172 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 FAM213BQ8TBF2 198 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LINC00526Q96FQ7 95 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 PRELID3AQ96N28 172 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 NAA38Q9BRA0 125 aaKnown RBP3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 IMUPQ9GZP8 106 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 JPT2Q9H910 190 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 ICOSQ9Y6W8 199 aa3.75□□□□□ -1.81
SMARCE1P3-201ENST00000553649 M0R2P5 195 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 PSCAO43653 123 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 SYNGR2O43760 224 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 COX8AP10176 69 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 BCL2P10415 239 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 UBE2G1P62253 170 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 HERVK_113P63121 156 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 C9orf153Q5TBE3 101 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 GTSF1Q8WW33 167 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 C9orf85Q96MD7 179 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 GNB1LQ9BYB4 327 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 KLF12Q9Y4X4 402 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LY96Q9Y6Y9 160 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LPAP08519 4548 aa3.74□□□□□ -1.81
SMARCE1P3-201ENST00000553649 LOC107984640A0A0U1RRK4 108 aa3.73□□□□□ -1.81
SMARCE1P3-201ENST00000553649 A0A1B0GWB2 263 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms