RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 RAB4BP61018 213 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 SMIM12Q96EX1 92 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 GTSF1LQ9H1H1 148 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 F8WDY8 70 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 SNAI2O43623 268 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 TTC32Q5I0X7 151 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 NAT8Q9UHE5 227 aa3.16□□□□□ -1.9
ATXN3-220ENST00000553491 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 A0A087WX48 190 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 A0A1B0GVY2 172 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 H7C1H1 209 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 RTL8CO15255 209 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 CXCL1P09341 107 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 IGLC6P0CF74 106 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 FOXA3P55318 350 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-220ENST00000553491 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
ATXN3-220ENST00000553491 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 LELP1Q5T871 98 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 Q6ZR54 194 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 LINC00336Q6ZUF6 198 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 LINC01551Q86U37 167 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
ATXN3-220ENST00000553491 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 TRAV26-2A0A0B4J265 109 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 UBE2L6O14933 153 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 PMCHP20382 165 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-220ENST00000553491 LINC00315P59091 139 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-220ENST00000553491 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
ATXN3-220ENST00000553491 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 ISOC2Q96AB3 205 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 UPK3BQ9BT76 320 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
ATXN3-220ENST00000553491 KLK12Q9UKR0 248 aa3.14□□□□□ -1.91
ATXN3-220ENST00000553491 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 M0QY20 66 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
ATXN3-220ENST00000553491 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
ATXN3-220ENST00000553491 UBE2D3P61077 147 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 UBE2D2P62837 147 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
ATXN3-220ENST00000553491 ERASQ7Z444 233 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 SPATA12Q7Z6I5 190 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 C10orf126Q8N4M7 172 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 NUP35Q8NFH5 326 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 UBE2WQ96B02 151 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
ATXN3-220ENST00000553491 DNAJC30Q96LL9 226 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 NAT8BQ9UHF3 227 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 V9GYV3 84 aa3.13□□□□□ -1.91
ATXN3-220ENST00000553491 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 LECT2O14960 151 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 CRPP02741 224 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 CKS2P33552 79 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 CTRLP40313 264 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 PKIAP61925 76 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 COTL1Q14019 142 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 TMEM97Q5BJF2 176 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 AMMECR1LQ6DCA0 310 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 RNASEKQ6P5S7 137 aaKnown RBP3.12□□□□□ -1.91
ATXN3-220ENST00000553491 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-220ENST00000553491 AMN1Q8IY45 258 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 LYSTQ99698 3801 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
ATXN3-220ENST00000553491 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms