RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 Q9UF83 564 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
HDAC7-230ENST00000552960 A6NDX4 124 aa9.09□□□□□ -0.95
HDAC7-230ENST00000552960 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
HDAC7-230ENST00000552960 IGHG2P01859 326 aa9.09□□□□□ -0.95
HDAC7-230ENST00000552960 COX6CP09669 75 aa9.09□□□□□ -0.95
HDAC7-230ENST00000552960 RHOHQ15669 191 aa9.09□□□□□ -0.95
HDAC7-230ENST00000552960 TRBV6-5A0A0K0K1A5 114 aa9.09□□□□□ -0.96
HDAC7-230ENST00000552960 NSUN5P1Q3KNT7 163 aa9.09□□□□□ -0.96
HDAC7-230ENST00000552960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
HDAC7-230ENST00000552960 IGKV2-29A2NJV5 120 aaPredicted RBP9.08□□□□□ -0.96
HDAC7-230ENST00000552960 SYNJ2BPP57105 145 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 DSCR9P59020 149 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 ICOSQ9Y6W8 199 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 TRBV10-2A0A0K0K1G8 114 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 J3QKU1 62 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 C9orf85Q96MD7 179 aa9.08□□□□□ -0.96
HDAC7-230ENST00000552960 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
HDAC7-230ENST00000552960 A0A0J9YX75 114 aa9.07□□□□□ -0.96
HDAC7-230ENST00000552960 TEP1Q99973 2627 aaKnown RBP9.06□□□□□ -0.96
HDAC7-230ENST00000552960 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
HDAC7-230ENST00000552960 H7C423 109 aa9.06□□□□□ -0.96
HDAC7-230ENST00000552960 RPL13AP40429 203 aaKnown RBP9.05□□□□□ -0.96
HDAC7-230ENST00000552960 A0A1W2PRX2 142 aa9.05□□□□□ -0.96
HDAC7-230ENST00000552960 DEFB136Q30KP8 78 aa9.05□□□□□ -0.96
HDAC7-230ENST00000552960 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
HDAC7-230ENST00000552960 IGHV1-58A0A0C4DH39 117 aa9.04□□□□□ -0.96
HDAC7-230ENST00000552960 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
HDAC7-230ENST00000552960 LITAFQ99732 161 aa9.03□□□□□ -0.96
HDAC7-230ENST00000552960 H3BUA1 57 aa9.02□□□□□ -0.97
HDAC7-230ENST00000552960 IGLV1-40P01703 118 aa9.02□□□□□ -0.97
HDAC7-230ENST00000552960 VSIG2Q96IQ7 327 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 TRGV11A0A075B6L2 103 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 DEFB131AP59861 70 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 MIAQ16674 131 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 Q6ZSN1 163 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 K7EMT4 169 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 K7EQG2 157 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 RBMY1A1P0DJD3 496 aaKnown RBP9.01□□□□□ -0.97
HDAC7-230ENST00000552960 RBMY1CP0DJD4 496 aa9.01□□□□□ -0.97
HDAC7-230ENST00000552960 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
HDAC7-230ENST00000552960 RBMY1FQ15415 496 aaKnown RBP9.01□□□□□ -0.97
HDAC7-230ENST00000552960 SMR3AQ99954 134 aa9□□□□□ -0.97
HDAC7-230ENST00000552960 IGHV3OR16-12A0A075B7B8 117 aa9□□□□□ -0.97
HDAC7-230ENST00000552960 FSHBP01225 129 aa9□□□□□ -0.97
HDAC7-230ENST00000552960 LINC00467Q9BRT7 94 aa9□□□□□ -0.97
HDAC7-230ENST00000552960 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
HDAC7-230ENST00000552960 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
HDAC7-230ENST00000552960 TMEM61Q8N0U2 210 aa8.99□□□□□ -0.97
HDAC7-230ENST00000552960 FAM104AQ969W3 186 aa8.99□□□□□ -0.97
HDAC7-230ENST00000552960 FAM110AQ9BQ89 295 aa8.99□□□□□ -0.97
HDAC7-230ENST00000552960 C18orf65Q6ZTR6 163 aa8.99□□□□□ -0.97
HDAC7-230ENST00000552960 CFHR3Q02985 330 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 Q6YL49 198 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 LRRC75A-AS1Q8N1F1 130 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 PPDPFQ9H3Y8 114 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 Q9H8V8 135 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 J3QLI3 93 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 M0QXV9 152 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 ATRQ13535 2644 aa8.98□□□□□ -0.97
HDAC7-230ENST00000552960 SETXQ7Z333 2677 aaKnown RBP8.98□□□□□ -0.97
HDAC7-230ENST00000552960 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 H3BT86 120 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 LST1O00453 97 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 RS1O15537 224 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 CIRBPQ14011 172 aaKnown RBP8.97□□□□□ -0.97
HDAC7-230ENST00000552960 LINC01587Q99440 93 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 NDUFA7O95182 113 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 PSMB8P28062 276 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 YAE1D1Q9NRH1 226 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 PYGO1Q9Y3Y4 419 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 HOXD3P31249 432 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-230ENST00000552960 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 UBE2D4Q9Y2X8 147 aa8.97□□□□□ -0.97
HDAC7-230ENST00000552960 TINCRA0A1B0GVN0 87 aa8.96□□□□□ -0.97
HDAC7-230ENST00000552960 ZNF702PQ9H963 129 aa8.96□□□□□ -0.97
HDAC7-230ENST00000552960 TMEM101Q96IK0 257 aa8.96□□□□□ -0.98
HDAC7-230ENST00000552960 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
HDAC7-230ENST00000552960 MRPL23Q16540 153 aaKnown RBP8.95□□□□□ -0.98
HDAC7-230ENST00000552960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-230ENST00000552960 BRI3O95415 125 aa8.95□□□□□ -0.98
HDAC7-230ENST00000552960 COX6A2Q02221 97 aa8.95□□□□□ -0.98
HDAC7-230ENST00000552960 KRTAP1-1Q07627 177 aa8.95□□□□□ -0.98
HDAC7-230ENST00000552960 HIVEP1P15822 2718 aa8.95□□□□□ -0.98
HDAC7-230ENST00000552960 IGHV3-53P01767 116 aa8.95□□□□□ -0.98
HDAC7-230ENST00000552960 KLK5Q9Y337 293 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-230ENST00000552960 SLURP1P55000 103 aa8.94□□□□□ -0.98
HDAC7-230ENST00000552960 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
HDAC7-230ENST00000552960 Q6Q795 121 aa8.94□□□□□ -0.98
HDAC7-230ENST00000552960 PRIMA1Q86XR5 153 aa8.94□□□□□ -0.98
HDAC7-230ENST00000552960 CITED2Q99967 270 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-230ENST00000552960 ESM1Q9NQ30 184 aa8.94□□□□□ -0.98
HDAC7-230ENST00000552960 IGKV3OR2-268A0A0C4DH90 116 aa8.93□□□□□ -0.98
HDAC7-230ENST00000552960 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
HDAC7-230ENST00000552960 LOC107984640A0A0U1RRK4 108 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms