RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
TMEM116-216ENST00000552800 NTM-AS1Q6ZSK4 140 aa6.9□□□□□ -1.3
TMEM116-216ENST00000552800 NEGR1Q7Z3B1 354 aa6.9□□□□□ -1.3
TMEM116-216ENST00000552800 ATOH7Q8N100 152 aa6.9□□□□□ -1.3
TMEM116-216ENST00000552800 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
TMEM116-216ENST00000552800 C11orf68Q9H3H3 251 aaKnown RBP6.9□□□□□ -1.3
TMEM116-216ENST00000552800 PRO0255Q9UI72 69 aa6.9□□□□□ -1.3
TMEM116-216ENST00000552800 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
TMEM116-216ENST00000552800 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
TMEM116-216ENST00000552800 IGHV4-28A0A0C4DH34 117 aa6.89□□□□□ -1.31
TMEM116-216ENST00000552800 DEFA6Q01524 100 aa6.89□□□□□ -1.31
TMEM116-216ENST00000552800 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
TMEM116-216ENST00000552800 HIGD1BQ9P298 99 aa6.89□□□□□ -1.31
TMEM116-216ENST00000552800 PKD1L1Q8TDX9 2849 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 E9PLD3 99 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 ZNF25P17030 456 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-216ENST00000552800 DEFB135Q30KP9 77 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 FAM222AQ5U5X8 452 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 VCX2Q9H322 139 aa6.88□□□□□ -1.31
TMEM116-216ENST00000552800 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 A0A1B0GUV1 79 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 TIRAPP58753 221 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 CTAG1AP78358 180 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 ZC2HC1BQ5TFG8 222 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 SH2D6Q7Z4S9 175 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 STPG4Q8N801 248 aa6.87□□□□□ -1.31
TMEM116-216ENST00000552800 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
TMEM116-216ENST00000552800 G3V4G9 280 aa6.86□□□□□ -1.31
TMEM116-216ENST00000552800 M0R143 59 aa6.86□□□□□ -1.31
TMEM116-216ENST00000552800 C2orf88Q9BSF0 95 aa6.86□□□□□ -1.31
TMEM116-216ENST00000552800 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
TMEM116-216ENST00000552800 NBEAL2Q6ZNJ1 2754 aa6.85□□□□□ -1.31
TMEM116-216ENST00000552800 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
TMEM116-216ENST00000552800 ATP5G1P05496 136 aa6.85□□□□□ -1.31
TMEM116-216ENST00000552800 C2orf91Q6ZV80 131 aa6.85□□□□□ -1.31
TMEM116-216ENST00000552800 LURAP1LQ8IV03 231 aa6.85□□□□□ -1.31
TMEM116-216ENST00000552800 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
TMEM116-216ENST00000552800 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 H0Y8G0 127 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 CCL25O15444 150 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
TMEM116-216ENST00000552800 DEFB130BP0DP73 79 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 DEFB130AP0DP74 79 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 UBE2D1P51668 147 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 SEC11AP67812 179 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 GAGE1Q13065 139 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 GAGE4Q13068 117 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 GAGE5Q13069 117 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 TM2D3Q9BRN9 247 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 TMEM243Q9BU79 118 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
TMEM116-216ENST00000552800 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
TMEM116-216ENST00000552800 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
TMEM116-216ENST00000552800 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
TMEM116-216ENST00000552800 DAD1P61803 113 aa6.83□□□□□ -1.32
TMEM116-216ENST00000552800 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
TMEM116-216ENST00000552800 ATP6V0E2Q8NHE4 81 aa6.83□□□□□ -1.32
TMEM116-216ENST00000552800 PHLDA1Q8WV24 401 aaPredicted RBP6.83□□□□□ -1.32
TMEM116-216ENST00000552800 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
TMEM116-216ENST00000552800 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
TMEM116-216ENST00000552800 TAL2Q16559 108 aa6.82□□□□□ -1.32
TMEM116-216ENST00000552800 C12orf74Q32Q52 190 aa6.82□□□□□ -1.32
TMEM116-216ENST00000552800 CELA1Q9UNI1 258 aa6.82□□□□□ -1.32
TMEM116-216ENST00000552800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
TMEM116-216ENST00000552800 LOC100131303A0A0U1RQF7 123 aa6.81□□□□□ -1.32
TMEM116-216ENST00000552800 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
TMEM116-216ENST00000552800 K7EIL1 84 aa6.81□□□□□ -1.32
TMEM116-216ENST00000552800 GYPEP15421 78 aa6.81□□□□□ -1.32
TMEM116-216ENST00000552800 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
TMEM116-216ENST00000552800 EMP1P54849 157 aa6.81□□□□□ -1.32
TMEM116-216ENST00000552800 MRPL23Q16540 153 aaKnown RBP6.81□□□□□ -1.32
TMEM116-216ENST00000552800 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
TMEM116-216ENST00000552800 LEPROTO15243 131 aa6.8□□□□□ -1.32
TMEM116-216ENST00000552800 HERVK_113P61574 105 aa6.8□□□□□ -1.32
TMEM116-216ENST00000552800 LINC01561Q8N1V8 128 aa6.8□□□□□ -1.32
TMEM116-216ENST00000552800 MAPKAPK5-AS1Q8N8E1 139 aa6.8□□□□□ -1.32
TMEM116-216ENST00000552800 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
TMEM116-216ENST00000552800 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
TMEM116-216ENST00000552800 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 MYMXA0A1B0GTQ4 84 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 HERVK_113P63121 156 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 DGAT2L7PQ6IED9 249 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 CEMP1Q6PRD7 247 aaPredicted RBP6.79□□□□□ -1.32
TMEM116-216ENST00000552800 Q6ZUT4 128 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 OR5A1Q8NGJ0 315 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 PLEKHB2Q96CS7 222 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 SPATA25Q9BR10 227 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
TMEM116-216ENST00000552800 A0A096LPF7 62 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 NMUP48645 174 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 HSD52Q0P140 79 aa6.78□□□□□ -1.32
TMEM116-216ENST00000552800 BVES-AS1Q5T3Y7 98 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms