RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 C9orf153Q5TBE3 101 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 NDUFA11Q86Y39 141 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 FAM213BQ8TBF2 198 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 COPS9Q8WXC6 57 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 WFDC6Q9BQY6 131 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 RERGLQ9H628 205 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 NAA60Q9H7X0 242 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 LINC00474Q9P2X8 69 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 PRO0255Q9UI72 69 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 R4GMQ9 66 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 GOLGA3Q08378 1498 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 ZNF518AQ6AHZ1 1483 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 MUC22E2RYF6 1773 aaPredicted RBP0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 DNAH12Q6ZR08 3092 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 ROS1P08922 2347 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 RTTNQ86VV8 2226 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 UNC13CQ8NB66 2214 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 MYH1P12882 1939 aa0.13□□□□□ -2.39
TGFBR1-210ENST00000552573 LAMA1P25391 3075 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 LRBAP50851 2863 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 DLEC1Q9Y238 1755 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 NBEAQ8NFP9 2946 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 SSC5DA1L4H1 1573 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 ADGRB1O14514 1584 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 MRC1P22897 1456 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 GRIN2AQ12879 1464 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 MBD5Q9P267 1494 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 VCANP13611 3396 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 PIGBOS1A0A0B4J2F0 54 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 F6UZH7 168 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 CHKB-CPT1BH3BT56 60 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 M0R3E3 92 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 SPINK1P00995 79 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 SNCAP37840 140 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 TPPP2P59282 170 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 GNG11P61952 73 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 TMEM170BQ5T4T1 132 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 Q6AWC8 147 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 ZNF818PQ6ZRF7 136 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 PP6455Q8WZ26 134 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 PPP3R2Q96LZ3 170 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 SNRNP25Q9BV90 132 aaKnown RBP0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 MANBALQ9NQG1 85 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 ZFHX3Q15911 3703 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 KIF13AQ9H1H9 1805 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 DAPK1P53355 1430 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 MYOM3Q5VTT5 1437 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 CDK5RAP2Q96SN8 1893 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 CSPG4Q6UVK1 2322 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 CNTRLQ7Z7A1 2325 aa0.12□□□□□ -2.39
TGFBR1-210ENST00000552573 SNRNP200O75643 2136 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CELSR1Q9NYQ6 3014 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CHD3Q12873 2000 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CFTRP13569 1480 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 BCL9LQ86UU0 1499 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 IFT140Q96RY7 1462 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CFAP54Q96N23 3096 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 AFDNP55196 1824 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 SPTBN5Q9NRC6 3674 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 ARAP2Q8WZ64 1704 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 TNS1Q9HBL0 1735 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 TRBV7-3A0A075B6L6 115 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 TRAV22A0A0B4J277 110 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 FAM24AA6NFZ4 105 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 F8VRH5 84 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 BCE1O60756 84 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 FGF7P21781 194 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CCL18P55774 89 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 PPP3R1P63098 170 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 Q5BKY6 102 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 BAGE2Q86Y30 109 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 SVBPQ8N300 66 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 FDCSPQ8NFU4 85 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 MYOZ3Q8TDC0 251 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 C1orf54Q8WWF1 131 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 TMEM203Q969S6 136 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 SPANXDQ9BXN6 97 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 PRO3102Q9H379 93 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 DYNLRB1Q9NP97 96 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 NDUFA4L2Q9NRX3 87 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CDK13Q14004 1512 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 F8P00451 2351 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 CPSF1Q10570 1443 aaKnown RBP0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 PPIP5K1Q6PFW1 1433 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 UNC80Q8N2C7 3258 aa0.11□□□□□ -2.39
TGFBR1-210ENST00000552573 EP400Q96L91 3159 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 C5orf42Q9H799 3197 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 NRXN2Q9P2S2 1712 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 DYNC1H1Q14204 4646 aaKnown RBP0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 NHSL1Q5SYE7 1610 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 LRP1Q07954 4544 aaKnown RBP0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 MGAQ8IWI9 3026 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 DMXL2Q8TDJ6 3036 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 IGLC7A0M8Q6 106 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 HMGN4O00479 90 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 TNFP01375 233 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 UBA52P62987 128 aaKnown RBP0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 C12orf73Q69YU5 71 aa0.1□□□□□ -2.39
TGFBR1-210ENST00000552573 Q6JHZ5 121 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms