RNA–Protein interactions for RNA: ENST00000552275.1

ATP2B1-210, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-210ENST00000552275 HMGN4O00479 90 aa0.15□□□□□ -2.39
ATP2B1-210ENST00000552275 BCE1O60756 84 aa0.15□□□□□ -2.39
ATP2B1-210ENST00000552275 MYOZ3Q8TDC0 251 aa0.15□□□□□ -2.39
ATP2B1-210ENST00000552275 LINC00472Q9H8W2 130 aa0.15□□□□□ -2.39
ATP2B1-210ENST00000552275 LAMC1P11047 1609 aa0.15□□□□□ -2.39
ATP2B1-210ENST00000552275 SPCS1Q9Y6A9 102 aa0.14□□□□□ -2.39
ATP2B1-210ENST00000552275 LINC01558Q9Y6Z2 57 aa0.14□□□□□ -2.39
ATP2B1-210ENST00000552275 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
ATP2B1-210ENST00000552275 TCHHQ07283 1943 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 TRAV22A0A0B4J277 110 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 UBE2L5PA0A1B0GUS4 154 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 LOC285095A0A1B0GVY8 99 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 IFITM1P13164 125 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 UBE2L3P68036 154 aaKnown RBP0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 C2orf88Q9BSF0 95 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 IER3IP1Q9Y5U9 82 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 SMG6Q86US8 1419 aaKnown RBP0.13□□□□□ -2.39
ATP2B1-210ENST00000552275 ERCC6L2Q5T890 1561 aa0.12□□□□□ -2.39
ATP2B1-210ENST00000552275 APOC3P02656 99 aa0.12□□□□□ -2.39
ATP2B1-210ENST00000552275 S100A3P33764 101 aa0.12□□□□□ -2.39
ATP2B1-210ENST00000552275 NHSL1Q5SYE7 1610 aa0.12□□□□□ -2.39
ATP2B1-210ENST00000552275 ANK2Q01484 3957 aa0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 F6UZH7 168 aa0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 M0R3E3 92 aa0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 CORTO00230 105 aa0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 CFDP00746 253 aaPredicted RBP0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 DPH3P1Q9H4G8 78 aa0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 ZNF292O60281 2723 aa0.11□□□□□ -2.39
ATP2B1-210ENST00000552275 COL7A1Q02388 2944 aa0.1□□□□□ -2.39
ATP2B1-210ENST00000552275 GNG4P50150 75 aa0.1□□□□□ -2.39
ATP2B1-210ENST00000552275 Q6JHZ5 121 aa0.1□□□□□ -2.39
ATP2B1-210ENST00000552275 MYOM1P52179 1685 aa0.1□□□□□ -2.39
ATP2B1-210ENST00000552275 EIF4G3O43432 1585 aaKnown RBP0.1□□□□□ -2.39
ATP2B1-210ENST00000552275 FAM24AA6NFZ4 105 aa0.09□□□□□ -2.4
ATP2B1-210ENST00000552275 LINC00587B1AMM8 73 aa0.08□□□□□ -2.4
ATP2B1-210ENST00000552275 CHKB-CPT1BH3BT56 60 aa0.08□□□□□ -2.4
ATP2B1-210ENST00000552275 ATP5EP56381 51 aaPredicted RBP0.08□□□□□ -2.4
ATP2B1-210ENST00000552275 PPP3R1P63098 170 aa0.08□□□□□ -2.4
ATP2B1-210ENST00000552275 Q8IZM0 81 aa0.08□□□□□ -2.4
ATP2B1-210ENST00000552275 SYNE2Q8WXH0 6885 aaKnown RBP0.08□□□□□ -2.4
ATP2B1-210ENST00000552275 C10orf71Q711Q0 1435 aa0.07□□□□□ -2.4
ATP2B1-210ENST00000552275 SFT2D2O95562 160 aa0.07□□□□□ -2.4
ATP2B1-210ENST00000552275 WFDC2Q14508 124 aa0.07□□□□□ -2.4
ATP2B1-210ENST00000552275 TMEM203Q969S6 136 aa0.07□□□□□ -2.4
ATP2B1-210ENST00000552275 SPTBN2O15020 2390 aa0.07□□□□□ -2.4
ATP2B1-210ENST00000552275 NSD1Q96L73 2696 aaPredicted RBP0.07□□□□□ -2.4
ATP2B1-210ENST00000552275 HIVEP3Q5T1R4 2406 aa0.06□□□□□ -2.4
ATP2B1-210ENST00000552275 FLNCQ14315 2725 aa0.06□□□□□ -2.4
ATP2B1-210ENST00000552275 TP53AIP1Q9HCN2 124 aa0.06□□□□□ -2.4
ATP2B1-210ENST00000552275 GNG8Q9UK08 70 aa0.06□□□□□ -2.4
ATP2B1-210ENST00000552275 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
ATP2B1-210ENST00000552275 FSIP2Q5CZC0 6907 aa0.05□□□□□ -2.4
ATP2B1-210ENST00000552275 SVBPQ8N300 66 aa0.05□□□□□ -2.4
ATP2B1-210ENST00000552275 CDC42SE2Q9NRR3 84 aa0.05□□□□□ -2.4
ATP2B1-210ENST00000552275 RAPGEF6Q8TEU7 1601 aa0.05□□□□□ -2.4
ATP2B1-210ENST00000552275 UBR5O95071 2799 aaPredicted RBP0.04□□□□□ -2.4
ATP2B1-210ENST00000552275 ARHGEF5Q12774 1597 aa0.04□□□□□ -2.4
ATP2B1-210ENST00000552275 S100A1P23297 94 aa0.04□□□□□ -2.4
ATP2B1-210ENST00000552275 DCDP81605 110 aaKnown RBP0.04□□□□□ -2.4
ATP2B1-210ENST00000552275 UQCR10Q9UDW1 63 aa0.04□□□□□ -2.4
ATP2B1-210ENST00000552275 WDR7Q9Y4E6 1490 aa0.03□□□□□ -2.4
ATP2B1-210ENST00000552275 C2CD3Q4AC94 2353 aa0.03□□□□□ -2.4
ATP2B1-210ENST00000552275 TET3O43151 1660 aa0.03□□□□□ -2.4
ATP2B1-210ENST00000552275 I3L2K1 104 aa0.03□□□□□ -2.4
ATP2B1-210ENST00000552275 GNG11P61952 73 aa0.03□□□□□ -2.4
ATP2B1-210ENST00000552275 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
ATP2B1-210ENST00000552275 SHANK2Q9UPX8 1470 aa0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 PLCE1Q9P212 2302 aa0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 BTAF1O14981 1849 aa0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 FAM167A-AS1Q96KT0 104 aa0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 NXT2Q9NPJ8 142 aaKnown RBP0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 TENM4Q6N022 2769 aa0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 SCAPERQ9BY12 1400 aa0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 NRKQ7Z2Y5 1582 aa0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 PPRC1Q5VV67 1664 aaKnown RBP0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 MRPS10P82664 201 aaKnown RBP0.01□□□□□ -2.41
ATP2B1-210ENST00000552275 Q5VSD8 79 aa0.01□□□□□ -2.41
ATP2B1-210ENST00000552275 KDM5AP29375 1690 aaKnown RBP0.01□□□□□ -2.41
ATP2B1-210ENST00000552275 MAPKBP1O60336 1514 aa0□□□□□ -2.41
ATP2B1-210ENST00000552275 MGPP08493 103 aa0□□□□□ -2.41
ATP2B1-210ENST00000552275 SSPOA2VEC9 5147 aa-0□□□□□ -2.41
ATP2B1-210ENST00000552275 PZPP20742 1482 aa-0.01□□□□□ -2.41
ATP2B1-210ENST00000552275 DEFB109BQ30KR1 87 aa-0.01□□□□□ -2.41
ATP2B1-210ENST00000552275 WNK2Q9Y3S1 2297 aa-0.01□□□□□ -2.41
ATP2B1-210ENST00000552275 PAPPAQ13219 1627 aa-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 HMGXB3Q12766 1538 aa-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 C10orf142B7Z368 130 aa-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 IGLC1P0CG04 106 aa-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 SPRR4Q96PI1 79 aa-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 MYO7BQ6PIF6 2116 aa-0.02□□□□□ -2.41
ATP2B1-210ENST00000552275 ABCA2Q9BZC7 2435 aa-0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 TRBV6-1A0A0K0K1D8 114 aa-0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 FAIMQ9NVQ4 179 aa-0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 ARL2-SNX15V9GYD0 113 aa-0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 CACNA1AO00555 2505 aa-0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 PTPRQQ9UMZ3 2332 aa-0.03□□□□□ -2.41
ATP2B1-210ENST00000552275 NSD3Q9BZ95 1437 aa-0.04□□□□□ -2.42
ATP2B1-210ENST00000552275 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms