RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 DAD1P61803 113 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 AMMECR1LQ6DCA0 310 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 LINC00336Q6ZUF6 198 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 LINC00612Q8N6U2 182 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 FAM19A4Q96LR4 140 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 C18orf15Q96N68 181 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 LINC01587Q99440 93 aa5.76□□□□□ -1.49
RBFOX1-213ENST00000551752 TRAV8-6A0A0B4J262 113 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 KLLNB2CW77 178 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 H3BNG1 76 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 PRSS1P07477 247 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 NMUP48645 174 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 RBX1P62877 108 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 DAZ2Q13117 558 aaKnown RBP5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 LAGE3Q14657 143 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 ERASQ7Z444 233 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 KRTAP1-5Q9BYS1 174 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 HYDINQ4G0P3 5121 aa5.75□□□□□ -1.49
RBFOX1-213ENST00000551752 TRAV21A0A0B4J279 112 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 K7EMI3 77 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 K7EP34 96 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 M0R381 172 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 GAS8-AS1O95177 125 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 ATP5G1P05496 136 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 SMIM17P0DL12 118 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 GATA1P15976 413 aaPredicted RBP5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 EMP1P54849 157 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 SPANXN1Q5VSR9 72 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 UFSP1Q6NVU6 142 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 PCP2Q8IVA1 136 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 SMIM2Q9BVW6 85 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 CST9LQ9H4G1 147 aa5.74□□□□□ -1.49
RBFOX1-213ENST00000551752 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 A0A087WX48 190 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 TRAV12-1A0A0B4J245 112 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 GAGE10A6NGK3 116 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 H3BVH4 76 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 PRSS2P07478 247 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 AZU1P20160 251 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 ASIPP42127 132 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 TAL2Q16559 108 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 OR5A1Q8NGJ0 315 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 C20orf78Q9BR46 151 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 CHAC1Q9BUX1 264 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 DPH3P1Q9H4G8 78 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 HHLA3Q9XRX5 114 aa5.73□□□□□ -1.49
RBFOX1-213ENST00000551752 PPP1R17O96001 155 aa5.72□□□□□ -1.49
RBFOX1-213ENST00000551752 SMIM13P0DJ93 91 aa5.72□□□□□ -1.49
RBFOX1-213ENST00000551752 PLNP26678 52 aa5.72□□□□□ -1.49
RBFOX1-213ENST00000551752 OCIAD2Q56VL3 154 aa5.72□□□□□ -1.49
RBFOX1-213ENST00000551752 PRR9Q5T870 116 aa5.72□□□□□ -1.49
RBFOX1-213ENST00000551752 ZFAND2AQ8N6M9 145 aa5.72□□□□□ -1.49
RBFOX1-213ENST00000551752 IGKV2D-26A0A0A0MRZ7 120 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 A0A1W2PPM0 123 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 H3BUT2 72 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 H7C1H1 209 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 K7ERU9 68 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 Q6ZR54 194 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 MUC4Q99102 2169 aa5.71□□□□□ -1.5
RBFOX1-213ENST00000551752 TRAV26-2A0A0B4J265 109 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 F8VRH5 84 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 NXPH4O95158 308 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 DEFB130BP0DP73 79 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 DEFB130AP0DP74 79 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 FABP2P12104 132 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 S100A4P26447 101 aaKnown RBP5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 RPL32P62910 135 aaKnown RBP5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 NOP10Q9NPE3 64 aaKnown RBP5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 MRPL35Q9NZE8 188 aaKnown RBP5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
RBFOX1-213ENST00000551752 DNAH6Q9C0G6 4158 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 TRBV25-1A0A075B6N4 114 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 TRAV12-3A0A0B4J271 114 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 F5H768 121 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 CCL18P55774 89 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 CEND1Q8N111 149 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 C11orf72Q8NBR9 251 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 RASL10AQ92737 203 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 SCGB3A1Q96QR1 104 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 VPS25Q9BRG1 176 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 SPXQ9BT56 116 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 CHTOPQ9Y3Y2 248 aaKnown RBP5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 PHLDA3Q9Y5J5 127 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
RBFOX1-213ENST00000551752 BIRC6Q9NR09 4857 aa5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 IGHV1OR15-1A0A075B7D0 117 aa5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 PRM2P04554 102 aa5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 MGPP08493 103 aa5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 HTN1P15515 57 aa5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 RNASE4P34096 147 aaKnown RBP5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 FXYD2P54710 66 aa5.68□□□□□ -1.5
RBFOX1-213ENST00000551752 Q6ZQT7 251 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms