RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-211ENST00000551497 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
SMARCD1-211ENST00000551497 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
SMARCD1-211ENST00000551497 C1orf43Q9BWL3 253 aa10.04□□□□□ -0.8
SMARCD1-211ENST00000551497 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
SMARCD1-211ENST00000551497 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
SMARCD1-211ENST00000551497 COX11Q9Y6N1 276 aa10.03□□□□□ -0.8
SMARCD1-211ENST00000551497 FAT2Q9NYQ8 4349 aa10.03□□□□□ -0.8
SMARCD1-211ENST00000551497 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
SMARCD1-211ENST00000551497 ZNF664Q8N3J9 261 aa10.02□□□□□ -0.81
SMARCD1-211ENST00000551497 EREGO14944 169 aa10.01□□□□□ -0.81
SMARCD1-211ENST00000551497 RNASE13Q5GAN3 156 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-211ENST00000551497 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
SMARCD1-211ENST00000551497 TMEM18Q96B42 140 aa10.01□□□□□ -0.81
SMARCD1-211ENST00000551497 OPRPNQ99935 248 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-211ENST00000551497 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-211ENST00000551497 TRAV8-4A0A0B4J246 113 aa10□□□□□ -0.81
SMARCD1-211ENST00000551497 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
SMARCD1-211ENST00000551497 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
SMARCD1-211ENST00000551497 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
SMARCD1-211ENST00000551497 SCO1O75880 301 aa9.99□□□□□ -0.81
SMARCD1-211ENST00000551497 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
SMARCD1-211ENST00000551497 GAGE12HA6NDE8 117 aa9.98□□□□□ -0.81
SMARCD1-211ENST00000551497 SMAGPQ0VAQ4 97 aa9.98□□□□□ -0.81
SMARCD1-211ENST00000551497 Q6ZUT4 128 aa9.98□□□□□ -0.81
SMARCD1-211ENST00000551497 Q8N814 137 aa9.98□□□□□ -0.81
SMARCD1-211ENST00000551497 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
SMARCD1-211ENST00000551497 COLCA2A8K830 154 aa9.97□□□□□ -0.81
SMARCD1-211ENST00000551497 C16orf90A8MZG2 172 aa9.97□□□□□ -0.81
SMARCD1-211ENST00000551497 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
SMARCD1-211ENST00000551497 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
SMARCD1-211ENST00000551497 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
SMARCD1-211ENST00000551497 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
SMARCD1-211ENST00000551497 PKD1P98161 4303 aa9.96□□□□□ -0.81
SMARCD1-211ENST00000551497 USP17L23D6RBM5 183 aa9.96□□□□□ -0.82
SMARCD1-211ENST00000551497 K7EMI3 77 aa9.96□□□□□ -0.82
SMARCD1-211ENST00000551497 C18orf32Q8TCD1 76 aa9.96□□□□□ -0.82
SMARCD1-211ENST00000551497 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-211ENST00000551497 LINC01546A6NGU7 62 aa9.95□□□□□ -0.82
SMARCD1-211ENST00000551497 CCL25O15444 150 aa9.95□□□□□ -0.82
SMARCD1-211ENST00000551497 XCL1P47992 114 aa9.95□□□□□ -0.82
SMARCD1-211ENST00000551497 URB1-AS1Q96HZ7 61 aa9.95□□□□□ -0.82
SMARCD1-211ENST00000551497 CYSLTR1Q9Y271 337 aa9.95□□□□□ -0.82
SMARCD1-211ENST00000551497 TRAV13-1A0A0B4J241 112 aa9.94□□□□□ -0.82
SMARCD1-211ENST00000551497 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-211ENST00000551497 SS18Q15532 418 aa9.94□□□□□ -0.82
SMARCD1-211ENST00000551497 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
SMARCD1-211ENST00000551497 PYGO1Q9Y3Y4 419 aa9.94□□□□□ -0.82
SMARCD1-211ENST00000551497 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
SMARCD1-211ENST00000551497 IGIPA6NJ69 53 aa9.93□□□□□ -0.82
SMARCD1-211ENST00000551497 TRGC2P03986 189 aa9.93□□□□□ -0.82
SMARCD1-211ENST00000551497 FOXI1Q12951 378 aa9.93□□□□□ -0.82
SMARCD1-211ENST00000551497 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
SMARCD1-211ENST00000551497 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
SMARCD1-211ENST00000551497 PRSS1P07477 247 aa9.92□□□□□ -0.82
SMARCD1-211ENST00000551497 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
SMARCD1-211ENST00000551497 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
SMARCD1-211ENST00000551497 C1orf196B1AJZ1 125 aa9.91□□□□□ -0.82
SMARCD1-211ENST00000551497 LINC00614P0C842 121 aa9.91□□□□□ -0.82
SMARCD1-211ENST00000551497 CDPF1Q6NVV7 123 aa9.91□□□□□ -0.82
SMARCD1-211ENST00000551497 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-211ENST00000551497 G0S2P27469 103 aa9.9□□□□□ -0.82
SMARCD1-211ENST00000551497 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
SMARCD1-211ENST00000551497 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
SMARCD1-211ENST00000551497 TMEM141Q96I45 108 aa9.9□□□□□ -0.82
SMARCD1-211ENST00000551497 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
SMARCD1-211ENST00000551497 HERC2O95714 4834 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 IFITM10A6NMD0 228 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 GCSHP23434 173 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 C14orf177Q52M58 125 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 C15orf56Q8N910 161 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
SMARCD1-211ENST00000551497 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
SMARCD1-211ENST00000551497 LINC00173Q6ZV60 143 aa9.88□□□□□ -0.83
SMARCD1-211ENST00000551497 AMELXQ99217 191 aa9.88□□□□□ -0.83
SMARCD1-211ENST00000551497 VCX2Q9H322 139 aa9.88□□□□□ -0.83
SMARCD1-211ENST00000551497 A0A096LNJ9 63 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 hDV102S1A0JD36 115 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 HIGD2BQ4VC39 106 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 TEX43Q6ZNM6 134 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 ERASQ7Z444 233 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 C5orf38Q86SI9 138 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 PKHD1P08F94 4074 aa9.87□□□□□ -0.83
SMARCD1-211ENST00000551497 SLPIP03973 132 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 RAB5BP61020 215 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 COX6A2Q02221 97 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 Q6ZN92 141 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 TIMM17AQ99595 171 aa9.86□□□□□ -0.83
SMARCD1-211ENST00000551497 COX7A2LO14548 114 aa9.85□□□□□ -0.83
SMARCD1-211ENST00000551497 ATP6V1G1O75348 118 aa9.85□□□□□ -0.83
SMARCD1-211ENST00000551497 NPSP0C0P6 89 aa9.85□□□□□ -0.83
SMARCD1-211ENST00000551497 UBE2D1P51668 147 aa9.85□□□□□ -0.83
SMARCD1-211ENST00000551497 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
SMARCD1-211ENST00000551497 S100A1P23297 94 aa9.84□□□□□ -0.83
SMARCD1-211ENST00000551497 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
SMARCD1-211ENST00000551497 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms