RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 PDCD10Q9BUL8 212 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 V9GYH0 126 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 ARAP2Q8WZ64 1704 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 K7EQZ3 153 aa-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 HIST1H1DP16402 221 aaKnown RBP-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 RBM3P98179 157 aaKnown RBP-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 DOCK1Q14185 1865 aa-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 USF3Q68DE3 2245 aa-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 USH2AO75445 5202 aa-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 HERC2O95714 4834 aa-0.68□□□□□ -2.52
SCAF11-215ENST00000551391 PKHD1P08F94 4074 aa-0.69□□□□□ -2.52
SCAF11-215ENST00000551391 ARPC4P59998 168 aa-0.69□□□□□ -2.52
SCAF11-215ENST00000551391 Q6AWC8 147 aa-0.69□□□□□ -2.52
SCAF11-215ENST00000551391 TTC9CQ8N5M4 171 aa-0.69□□□□□ -2.52
SCAF11-215ENST00000551391 ZNF236Q9UL36 1845 aa-0.69□□□□□ -2.52
SCAF11-215ENST00000551391 TENM2Q9NT68 2774 aa-0.69□□□□□ -2.52
SCAF11-215ENST00000551391 PAPPAQ13219 1627 aa-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 GVINP1Q7Z2Y8 2422 aa-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 SNRNP25Q9BV90 132 aaKnown RBP-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 RERGLQ9H628 205 aa-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 LINC00472Q9H8W2 130 aa-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 FLGP20930 4061 aaPredicted RBP-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 PI4KAP42356 2102 aa-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 BICRAQ9NZM4 1560 aa-0.7□□□□□ -2.52
SCAF11-215ENST00000551391 DOCK2Q92608 1830 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 KIF21AQ7Z4S6 1674 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 TRBV6-1A0A0K0K1D8 114 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 SPRR2EP22531 72 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 KRTAP6-2Q3LI66 62 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 PIGYQ3MUY2 71 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 TMEM170BQ5T4T1 132 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 LSM10Q969L4 123 aaKnown RBP-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 SERP1Q9Y6X1 66 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 PIEZO2Q9H5I5 2752 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 SBF2Q86WG5 1849 aa-0.71□□□□□ -2.52
SCAF11-215ENST00000551391 MAP1BP46821 2468 aaKnown RBP-0.72□□□□□ -2.52
SCAF11-215ENST00000551391 APC2O95996 2303 aa-0.72□□□□□ -2.52
SCAF11-215ENST00000551391 LOC730098B7Z3J9 87 aa-0.72□□□□□ -2.52
SCAF11-215ENST00000551391 UQCR11O14957 56 aa-0.72□□□□□ -2.52
SCAF11-215ENST00000551391 Q6JHZ5 121 aa-0.72□□□□□ -2.52
SCAF11-215ENST00000551391 MYO7BQ6PIF6 2116 aa-0.72□□□□□ -2.52
SCAF11-215ENST00000551391 RIMS1Q86UR5 1692 aaKnown RBP-0.72□□□□□ -2.53
SCAF11-215ENST00000551391 CSPG4Q6UVK1 2322 aa-0.72□□□□□ -2.53
SCAF11-215ENST00000551391 TPPP2P59282 170 aa-0.73□□□□□ -2.53
SCAF11-215ENST00000551391 BAGE2Q86Y30 109 aa-0.73□□□□□ -2.53
SCAF11-215ENST00000551391 NDUFA4L2Q9NRX3 87 aa-0.73□□□□□ -2.53
SCAF11-215ENST00000551391 FXYD6-FXYD2A0A087WZ82 144 aa-0.74□□□□□ -2.53
SCAF11-215ENST00000551391 F8VRH5 84 aa-0.74□□□□□ -2.53
SCAF11-215ENST00000551391 M0R2T5 61 aa-0.74□□□□□ -2.53
SCAF11-215ENST00000551391 NEBP20929 6669 aa-0.74□□□□□ -2.53
SCAF11-215ENST00000551391 MAP1AP78559 2803 aaPredicted RBP-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 APOC3P02656 99 aa-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 SELENOWP63302 87 aa-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 MGST2Q99735 147 aa-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 NAA60Q9H7X0 242 aa-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 DYNLRB1Q9NP97 96 aa-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 SPTA1P02549 2419 aa-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 EP300Q09472 2414 aaPredicted RBP-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 SETXQ7Z333 2677 aaKnown RBP-0.75□□□□□ -2.53
SCAF11-215ENST00000551391 ATRQ13535 2644 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 KLK9Q2XQG4 91 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 ARL11Q969Q4 196 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 LINC00470Q9BZP3 86 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 IQSEC2Q5JU85 1478 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 WDR7Q9Y4E6 1490 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 STARD9Q9P2P6 4700 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 WNK1Q9H4A3 2382 aa-0.76□□□□□ -2.53
SCAF11-215ENST00000551391 SVEP1Q4LDE5 3571 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 PHLPP1O60346 1717 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 TRBV7-3A0A075B6L6 115 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 COX6B1P14854 86 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 SPRR1BP22528 89 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 BTG2P78543 158 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 LINC01558Q9Y6Z2 57 aa-0.77□□□□□ -2.53
SCAF11-215ENST00000551391 RAPGEF6Q8TEU7 1601 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 CREBBPQ92793 2442 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 CPSF1Q10570 1443 aaKnown RBP-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 IGLC7A0M8Q6 106 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 SPINK4O60575 86 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 DEFB123Q8N688 67 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 PPP3R2Q96LZ3 170 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 TSC2P49815 1807 aa-0.78□□□□□ -2.53
SCAF11-215ENST00000551391 EPPK1P58107 5090 aaKnown RBP-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 SHANK2Q9UPX8 1470 aa-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 ACANP16112 2415 aa-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 NF1P21359 2839 aa-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 MEIG1Q5JSS6 88 aa-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 SPANXDQ9BXN6 97 aa-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 MYOM1P52179 1685 aa-0.79□□□□□ -2.54
SCAF11-215ENST00000551391 UBR4Q5T4S7 5183 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 PRKDCP78527 4128 aaKnown RBP-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 LOC285095A0A1B0GVY8 99 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 FAM25AB3EWG3 89 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 FAM25CB3EWG5 89 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 FAM25GB3EWG6 89 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 HMGN4O00479 90 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 TNFP01375 233 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 Q56UQ5 140 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 SHROOM2Q13796 1616 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 NBEAL1Q6ZS30 2694 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms