RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PIEZO2Q9H5I5 2752 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 MALRD1Q5VYJ5 2156 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 DSPP15924 2871 aaKnown RBP2.35□□□□□ -2.03
CCNT1-203ENST00000550457 TRAV12-2A0A075B6T6 113 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 IGHV3-16A0A0C4DH30 117 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 EPM2AB3EWF7 344 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 USP17L23D6RBM5 183 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 K7EMT4 169 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 GNRH2O43555 120 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 NDUFC1O43677 76 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 IGHV3-23P01764 117 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 IGHG2P01859 326 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 RPL28P46779 137 aaKnown RBP2.35□□□□□ -2.03
CCNT1-203ENST00000550457 SYNJ2BPP57105 145 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 NDPQ00604 133 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 CEMP1Q6PRD7 247 aaPredicted RBP2.35□□□□□ -2.03
CCNT1-203ENST00000550457 CLEC19AQ6UXS0 136 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 Q8N9W7 124 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 LINC00308Q8TCZ7 52 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 SMCR5Q8TEV8 140 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 VCANP13611 3396 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 SVILO95425 2214 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 PLXNB1O43157 2135 aa2.35□□□□□ -2.03
CCNT1-203ENST00000550457 TNRC18O15417 2968 aaPredicted RBP2.34□□□□□ -2.03
CCNT1-203ENST00000550457 IGHV3OR16-10A0A075B7F0 116 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 TRAV41A0A0B4J266 112 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 E7EQL1 145 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 JMJD7-PLA2G4BH0Y9G9 81 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 H3BQ85 93 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 KLRB1Q12918 225 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 SERTAD4-AS1Q5TG53 156 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 LYPD5Q6UWN5 251 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 C3orf56Q8N813 242 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 JPT2Q9H910 190 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 LAMTOR3Q9UHA4 124 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 UBE2D4Q9Y2X8 147 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 KLK5Q9Y337 293 aaPredicted RBP2.34□□□□□ -2.03
CCNT1-203ENST00000550457 S4R3C0 116 aa2.34□□□□□ -2.03
CCNT1-203ENST00000550457 MED13Q9UHV7 2174 aa2.34□□□□□ -2.04
CCNT1-203ENST00000550457 REV3LO60673 3130 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 ZNF318Q5VUA4 2279 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 CFAP54Q96N23 3096 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 TRAV7A0A075B6U4 112 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV1OR15-1A0A075B7D0 117 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 SMIM26A0A096LP01 95 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3-66A0A0C4DH42 116 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 RBMY1BA6NDE4 496 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 RBMY1EA6NEQ0 496 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 CRPP02741 224 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 CCKP06307 115 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 RBMY1DP0C7P1 496 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 RBMY1A1P0DJD3 496 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 RBMY1CP0DJD4 496 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 PRB4P10163 310 aaPredicted RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 SNRPD3P62318 126 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 RBMY1FQ15415 496 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 ECSCRQ19T08 205 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 ATP1A1-AS1Q5TC04 95 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 Q5XG85 94 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 OPRPNQ99935 248 aaPredicted RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 USP34Q70CQ2 3546 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 ANKHD1Q8IWZ3 2542 aaKnown RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 CDH23Q9H251 3354 aa2.33□□□□□ -2.04
CCNT1-203ENST00000550457 COL27A1Q8IZC6 1860 aaPredicted RBP2.33□□□□□ -2.04
CCNT1-203ENST00000550457 ICE1Q9Y2F5 2266 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3-64A0A075B6Q5 118 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3OR16-8A0A075B7F1 116 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3-35A0A0C4DH35 117 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 A0A0J9YWU9 116 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 TMEM89A2RUT3 159 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 KNCNA6PVL3 124 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 ATP6V0E1O15342 81 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 IGF1P05019 195 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 PDE6GP18545 87 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 KLKP1Q107X0 134 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 FAM74A4Q5TZK3 123 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 LINC01561Q8N1V8 128 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 C5orf56Q8N8D9 126 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 FAM104AQ969W3 186 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 ZNF625Q96I27 306 aaPredicted RBP2.32□□□□□ -2.04
CCNT1-203ENST00000550457 LINC00467Q9BRT7 94 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 TMEM243Q9BU79 118 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 Q9H8V8 135 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 ORMDL1Q9P0S3 153 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 MOB4Q9Y3A3 225 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 C22orf24Q9Y442 160 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 ROS1P08922 2347 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 CEP250Q9BV73 2442 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 SZT2Q5T011 3432 aa2.32□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3OR16-13A0A075B7E8 117 aa2.31□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3-49A0A0A0MS15 119 aa2.31□□□□□ -2.04
CCNT1-203ENST00000550457 IGHV3-74A0A0B4J1X5 117 aa2.31□□□□□ -2.04
CCNT1-203ENST00000550457 TRAV12-3A0A0B4J271 114 aa2.31□□□□□ -2.04
CCNT1-203ENST00000550457 IBA57-AS1B1ANH7 110 aa2.31□□□□□ -2.04
CCNT1-203ENST00000550457 TMEM256-PLSCR3K7ERE1 68 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms