RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 TCTAP57738 103 aa17.16■□□□□ 0.34
TGFBR1-207ENST00000549766 Q6ZUT4 128 aa17.16■□□□□ 0.34
TGFBR1-207ENST00000549766 MRPS16Q9Y3D3 137 aaKnown RBP17.16■□□□□ 0.34
TGFBR1-207ENST00000549766 DLEU1O43261 78 aa17.15■□□□□ 0.34
TGFBR1-207ENST00000549766 ATP6V0E2Q8NHE4 81 aa17.15■□□□□ 0.34
TGFBR1-207ENST00000549766 NMUP48645 174 aa17.14■□□□□ 0.33
TGFBR1-207ENST00000549766 CTAG1AP78358 180 aa17.14■□□□□ 0.33
TGFBR1-207ENST00000549766 C12orf74Q32Q52 190 aa17.14■□□□□ 0.33
TGFBR1-207ENST00000549766 SMAGPQ0VAQ4 97 aa17.13■□□□□ 0.33
TGFBR1-207ENST00000549766 PCP2Q8IVA1 136 aa17.13■□□□□ 0.33
TGFBR1-207ENST00000549766 NBEAL1Q6ZS30 2694 aa17.12■□□□□ 0.33
TGFBR1-207ENST00000549766 F5H768 121 aa17.11■□□□□ 0.33
TGFBR1-207ENST00000549766 RNASE13Q5GAN3 156 aaKnown RBP17.11■□□□□ 0.33
TGFBR1-207ENST00000549766 E9PLD3 99 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 DGAT2L7PQ6IED9 249 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 CHAC1Q9BUX1 264 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 TRAV26-1A0A087WT03 109 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 A0A0J9YXV3 536 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 A0A0J9YY99 117 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 C2orf91Q6ZV80 131 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 TM2D3Q9BRN9 247 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 SNHG12Q9BXW3 62 aa17.1■□□□□ 0.33
TGFBR1-207ENST00000549766 UBE2L6O14933 153 aa17.09■□□□□ 0.33
TGFBR1-207ENST00000549766 CDC42SE2Q9NRR3 84 aa17.09■□□□□ 0.33
TGFBR1-207ENST00000549766 C2orf88Q9BSF0 95 aa17.08■□□□□ 0.32
TGFBR1-207ENST00000549766 ZNF22P17026 224 aaPredicted RBP17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 ZNF25P17030 456 aaPredicted RBP17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 UBE2D1P51668 147 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 SPATA25Q9BR10 227 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 NOTCH1P46531 2555 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 M0R143 59 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 SIVA1O15304 175 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 TMEM170BQ5T4T1 132 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 TTTY13Q9BZ97 58 aa17.07■□□□□ 0.32
TGFBR1-207ENST00000549766 A0A0J9YWU9 116 aa17.06■□□□□ 0.32
TGFBR1-207ENST00000549766 TINCRA0A1B0GVN0 87 aa17.06■□□□□ 0.32
TGFBR1-207ENST00000549766 EREGO14944 169 aa17.06■□□□□ 0.32
TGFBR1-207ENST00000549766 HTN3P15516 51 aa17.06■□□□□ 0.32
TGFBR1-207ENST00000549766 AMMECR1LQ6DCA0 310 aa17.06■□□□□ 0.32
TGFBR1-207ENST00000549766 OR5A1Q8NGJ0 315 aa17.06■□□□□ 0.32
TGFBR1-207ENST00000549766 HERVK_113P61574 105 aa17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 FAM19A3Q7Z5A8 133 aa17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 TMEM223A0PJW6 202 aa17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 GAGE6Q13070 117 aa17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 MRPL23Q16540 153 aaKnown RBP17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 DEFB121Q5J5C9 76 aa17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 TMEM101Q96IK0 257 aa17.04■□□□□ 0.32
TGFBR1-207ENST00000549766 A0A096LPF7 62 aa17.03■□□□□ 0.32
TGFBR1-207ENST00000549766 MAPKAPK5-AS1Q8N8E1 139 aa17.03■□□□□ 0.32
TGFBR1-207ENST00000549766 CHCHD5Q9BSY4 110 aa17.03■□□□□ 0.32
TGFBR1-207ENST00000549766 TRAV8-6A0A0B4J262 113 aa17.02■□□□□ 0.32
TGFBR1-207ENST00000549766 Q6ZTC4 211 aa17.02■□□□□ 0.32
TGFBR1-207ENST00000549766 H3BNG1 76 aa17.01■□□□□ 0.31
TGFBR1-207ENST00000549766 TIRAPP58753 221 aa17.01■□□□□ 0.31
TGFBR1-207ENST00000549766 SH2D6Q7Z4S9 175 aa17.01■□□□□ 0.31
TGFBR1-207ENST00000549766 ICOSQ9Y6W8 199 aa17.01■□□□□ 0.31
TGFBR1-207ENST00000549766 LBHQ53QV2 105 aaPredicted RBP17.01■□□□□ 0.31
TGFBR1-207ENST00000549766 IGLV4-60A0A075B6I1 120 aa16.99■□□□□ 0.31
TGFBR1-207ENST00000549766 IGLV5-45A0A087WSX0 123 aa16.99■□□□□ 0.31
TGFBR1-207ENST00000549766 HIGD1BQ9P298 99 aa16.99■□□□□ 0.31
TGFBR1-207ENST00000549766 MGAM2Q2M2H8 2515 aa16.99■□□□□ 0.31
TGFBR1-207ENST00000549766 LINC00242Q5T6M2 205 aa16.98■□□□□ 0.31
TGFBR1-207ENST00000549766 MRAPQ8TCY5 172 aa16.98■□□□□ 0.31
TGFBR1-207ENST00000549766 A0A1B0GUV1 79 aa16.97■□□□□ 0.31
TGFBR1-207ENST00000549766 C11orf45Q8TAV5 145 aa16.97■□□□□ 0.31
TGFBR1-207ENST00000549766 MYMXA0A1B0GTQ4 84 aa16.97■□□□□ 0.31
TGFBR1-207ENST00000549766 SEC11AP67812 179 aa16.96■□□□□ 0.31
TGFBR1-207ENST00000549766 MPV17L2Q567V2 206 aa16.96■□□□□ 0.31
TGFBR1-207ENST00000549766 LEPROTO15243 131 aa16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 HINT1P49773 126 aaPredicted RBP16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 TSPEAR-AS2P59090 65 aa16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 NANOS2P60321 138 aaKnown RBP16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 GEMIN7Q9H840 131 aaKnown RBP16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 HUWE1Q7Z6Z7 4374 aaKnown RBP16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 TENM3Q9P273 2699 aa16.95■□□□□ 0.3
TGFBR1-207ENST00000549766 HERVK_113P63121 156 aa16.94■□□□□ 0.3
TGFBR1-207ENST00000549766 COX6A2Q02221 97 aa16.94■□□□□ 0.3
TGFBR1-207ENST00000549766 TRAV13-1A0A0B4J241 112 aa16.94■□□□□ 0.3
TGFBR1-207ENST00000549766 J3QQQ9 107 aa16.93■□□□□ 0.3
TGFBR1-207ENST00000549766 RBX1P62877 108 aa16.93■□□□□ 0.3
TGFBR1-207ENST00000549766 LINC00469Q8N7U9 141 aa16.93■□□□□ 0.3
TGFBR1-207ENST00000549766 CDKN2A-AS1Q9UH64 79 aa16.93■□□□□ 0.3
TGFBR1-207ENST00000549766 BVES-AS1Q5T3Y7 98 aa16.92■□□□□ 0.3
TGFBR1-207ENST00000549766 LELP1Q5T871 98 aa16.92■□□□□ 0.3
TGFBR1-207ENST00000549766 ZNF815PA8K554 130 aa16.91■□□□□ 0.3
TGFBR1-207ENST00000549766 BATFQ16520 125 aa16.91■□□□□ 0.3
TGFBR1-207ENST00000549766 IGHV1-58A0A0C4DH39 117 aa16.91■□□□□ 0.3
TGFBR1-207ENST00000549766 TMEM262E9PQX1 116 aa16.91■□□□□ 0.3
TGFBR1-207ENST00000549766 PLEKHB2Q96CS7 222 aa16.91■□□□□ 0.3
TGFBR1-207ENST00000549766 HSD52Q0P140 79 aa16.9■□□□□ 0.3
TGFBR1-207ENST00000549766 DEFB131BA0A096LNP1 70 aa16.89■□□□□ 0.29
TGFBR1-207ENST00000549766 H3BRM9 83 aa16.89■□□□□ 0.29
TGFBR1-207ENST00000549766 IGHV3-30-3P0DP02 117 aa16.89■□□□□ 0.29
TGFBR1-207ENST00000549766 LYPD5Q6UWN5 251 aa16.89■□□□□ 0.29
TGFBR1-207ENST00000549766 IGHV3-64A0A075B6Q5 118 aa16.88■□□□□ 0.29
TGFBR1-207ENST00000549766 TRAV8-3A0A0A6YYJ7 113 aa16.88■□□□□ 0.29
TGFBR1-207ENST00000549766 LGALS3P17931 250 aaKnown RBP16.88■□□□□ 0.29
TGFBR1-207ENST00000549766 SPINK8P0C7L1 97 aa16.87■□□□□ 0.29
TGFBR1-207ENST00000549766 COL5A1-AS1Q5SY13 56 aa16.85■□□□□ 0.29
TGFBR1-207ENST00000549766 IGLV5-39A0A0G2JS06 123 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms