RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 VCX2Q9H322 139 aa11.91□□□□□ -0.5
LETMD1-220ENST00000549686 TRAV12-1A0A0B4J245 112 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 C3orf79P0CE67 100 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 AKR1D1P51857 326 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 KRTDAPP60985 99 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 PMVKQ15126 192 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 TEX43Q6ZNM6 134 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
LETMD1-220ENST00000549686 C20orf202A1L168 122 aa11.89□□□□□ -0.51
LETMD1-220ENST00000549686 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
LETMD1-220ENST00000549686 LINC01556Q5JQF7 62 aa11.89□□□□□ -0.51
LETMD1-220ENST00000549686 AMELXQ99217 191 aa11.89□□□□□ -0.51
LETMD1-220ENST00000549686 C2orf88Q9BSF0 95 aa11.89□□□□□ -0.51
LETMD1-220ENST00000549686 Q6ZUT4 128 aa11.88□□□□□ -0.51
LETMD1-220ENST00000549686 WFDC10BQ8IUB3 73 aa11.88□□□□□ -0.51
LETMD1-220ENST00000549686 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
LETMD1-220ENST00000549686 LOC105371267A0A1B0GV96 52 aa11.87□□□□□ -0.51
LETMD1-220ENST00000549686 K7EP13 123 aa11.87□□□□□ -0.51
LETMD1-220ENST00000549686 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
LETMD1-220ENST00000549686 FAM104AQ969W3 186 aa11.87□□□□□ -0.51
LETMD1-220ENST00000549686 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
LETMD1-220ENST00000549686 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
LETMD1-220ENST00000549686 IGLV4-60A0A075B6I1 120 aa11.86□□□□□ -0.51
LETMD1-220ENST00000549686 SIVA1O15304 175 aa11.86□□□□□ -0.51
LETMD1-220ENST00000549686 LGALS9CQ6DKI2 356 aa11.86□□□□□ -0.51
LETMD1-220ENST00000549686 Q8N976 141 aa11.86□□□□□ -0.51
LETMD1-220ENST00000549686 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
LETMD1-220ENST00000549686 H0Y8G0 127 aa11.84□□□□□ -0.51
LETMD1-220ENST00000549686 CCL25O15444 150 aa11.84□□□□□ -0.51
LETMD1-220ENST00000549686 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
LETMD1-220ENST00000549686 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
LETMD1-220ENST00000549686 LINC01545Q5VT33 79 aa11.84□□□□□ -0.51
LETMD1-220ENST00000549686 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
LETMD1-220ENST00000549686 F8VRH5 84 aa11.83□□□□□ -0.52
LETMD1-220ENST00000549686 SEC11AP67812 179 aa11.83□□□□□ -0.52
LETMD1-220ENST00000549686 ODF1Q14990 250 aa11.83□□□□□ -0.52
LETMD1-220ENST00000549686 JOSD1Q15040 202 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-220ENST00000549686 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
LETMD1-220ENST00000549686 Q9H8V8 135 aa11.83□□□□□ -0.52
LETMD1-220ENST00000549686 CHTOPQ9Y3Y2 248 aaKnown RBP11.83□□□□□ -0.52
LETMD1-220ENST00000549686 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
LETMD1-220ENST00000549686 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
LETMD1-220ENST00000549686 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
LETMD1-220ENST00000549686 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
LETMD1-220ENST00000549686 PRR34Q9NV39 138 aa11.82□□□□□ -0.52
LETMD1-220ENST00000549686 STARD9Q9P2P6 4700 aa11.82□□□□□ -0.52
LETMD1-220ENST00000549686 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
LETMD1-220ENST00000549686 PLNP26678 52 aa11.81□□□□□ -0.52
LETMD1-220ENST00000549686 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
LETMD1-220ENST00000549686 FAM19A3Q7Z5A8 133 aa11.81□□□□□ -0.52
LETMD1-220ENST00000549686 LINC00269Q8N2A0 174 aa11.81□□□□□ -0.52
LETMD1-220ENST00000549686 TGP01266 2768 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 DPM2O94777 84 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 CRPP02741 224 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 UBE2D1P51668 147 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 REG3AQ06141 175 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 Q8N3U1 123 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
LETMD1-220ENST00000549686 KLK12Q9UKR0 248 aa11.8□□□□□ -0.52
LETMD1-220ENST00000549686 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
LETMD1-220ENST00000549686 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
LETMD1-220ENST00000549686 IGLC3P0DOY3 106 aa11.79□□□□□ -0.52
LETMD1-220ENST00000549686 SS18Q15532 418 aa11.79□□□□□ -0.52
LETMD1-220ENST00000549686 ZC2HC1BQ5TFG8 222 aa11.79□□□□□ -0.52
LETMD1-220ENST00000549686 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
LETMD1-220ENST00000549686 TRAV8-4A0A0B4J246 113 aa11.78□□□□□ -0.52
LETMD1-220ENST00000549686 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
LETMD1-220ENST00000549686 TINCRA0A1B0GVN0 87 aa11.78□□□□□ -0.52
LETMD1-220ENST00000549686 MIAQ16674 131 aa11.78□□□□□ -0.52
LETMD1-220ENST00000549686 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
LETMD1-220ENST00000549686 IGKCP01834 107 aa11.77□□□□□ -0.53
LETMD1-220ENST00000549686 HERVK_113P63121 156 aa11.77□□□□□ -0.53
LETMD1-220ENST00000549686 TTC32Q5I0X7 151 aa11.77□□□□□ -0.53
LETMD1-220ENST00000549686 UBE2WQ96B02 151 aa11.77□□□□□ -0.53
LETMD1-220ENST00000549686 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.53
LETMD1-220ENST00000549686 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
LETMD1-220ENST00000549686 A0A0J9YXV3 536 aa11.76□□□□□ -0.53
LETMD1-220ENST00000549686 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
LETMD1-220ENST00000549686 SMIM6P0DI80 62 aa11.76□□□□□ -0.53
LETMD1-220ENST00000549686 PYY3Q5JQD4 70 aa11.76□□□□□ -0.53
LETMD1-220ENST00000549686 CHAC1Q9BUX1 264 aa11.76□□□□□ -0.53
LETMD1-220ENST00000549686 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
LETMD1-220ENST00000549686 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
LETMD1-220ENST00000549686 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
LETMD1-220ENST00000549686 ENHOQ6UWT2 76 aa11.75□□□□□ -0.53
LETMD1-220ENST00000549686 PMCHL2Q9BQD1 86 aa11.75□□□□□ -0.53
LETMD1-220ENST00000549686 CLPSL2Q6UWE3 100 aa11.74□□□□□ -0.53
LETMD1-220ENST00000549686 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
LETMD1-220ENST00000549686 C11orf86A6NJI1 115 aa11.73□□□□□ -0.53
LETMD1-220ENST00000549686 RMI2Q96E14 147 aa11.73□□□□□ -0.53
LETMD1-220ENST00000549686 H3BRM9 83 aa11.72□□□□□ -0.53
LETMD1-220ENST00000549686 CD164L2Q6UWJ8 174 aa11.72□□□□□ -0.53
LETMD1-220ENST00000549686 CHCHD10Q8WYQ3 142 aaPredicted RBP11.72□□□□□ -0.53
LETMD1-220ENST00000549686 HSBP1L1C9JCN9 74 aa11.71□□□□□ -0.53
LETMD1-220ENST00000549686 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
LETMD1-220ENST00000549686 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.53
LETMD1-220ENST00000549686 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms