RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 RNASEKQ6P5S7 137 aaKnown RBP5.2□□□□□ -1.58
SMARCD1-207ENST00000549526 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
SMARCD1-207ENST00000549526 C20orf203Q8NBC4 194 aa5.2□□□□□ -1.58
SMARCD1-207ENST00000549526 C7orf33Q8WU49 177 aa5.2□□□□□ -1.58
SMARCD1-207ENST00000549526 MRAP2Q96G30 205 aa5.2□□□□□ -1.58
SMARCD1-207ENST00000549526 RNF185Q96GF1 192 aa5.2□□□□□ -1.58
SMARCD1-207ENST00000549526 IGKV3OR2-268A0A0C4DH90 116 aa5.19□□□□□ -1.58
SMARCD1-207ENST00000549526 TRBV6-5A0A0K0K1A5 114 aa5.19□□□□□ -1.58
SMARCD1-207ENST00000549526 USP17L23D6RBM5 183 aa5.19□□□□□ -1.58
SMARCD1-207ENST00000549526 SMKR1H3BMG3 65 aa5.19□□□□□ -1.58
SMARCD1-207ENST00000549526 RPS10P46783 165 aaKnown RBP5.19□□□□□ -1.58
SMARCD1-207ENST00000549526 TMEM242Q9NWH2 141 aa5.19□□□□□ -1.58
SMARCD1-207ENST00000549526 TRAV8-4A0A0B4J246 113 aa5.18□□□□□ -1.58
SMARCD1-207ENST00000549526 MRPL54Q6P161 138 aaKnown RBP5.18□□□□□ -1.58
SMARCD1-207ENST00000549526 BTF3L4Q96K17 158 aa5.18□□□□□ -1.58
SMARCD1-207ENST00000549526 A0A087WYN8 130 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 A0A1B0GW15 77 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 H7C423 109 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 PPP1R2P9O14990 202 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 PPP1R17O96001 155 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 TSHBP01222 138 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 S100A8P05109 93 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 FGF6P10767 208 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 FCER1GP30273 86 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 CKS2P33552 79 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 POLR2KP53803 58 aaKnown RBP5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 HBBP68871 147 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 PNRC1Q12796 327 aaPredicted RBP5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 MRPL51Q4U2R6 128 aaKnown RBP5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 CLLU1Q5K131 121 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 FAM104BQ5XKR9 115 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 DGAT2L7PQ6IED9 249 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 KRTAP26-1Q6PEX3 210 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 SDIM1Q6ZPB5 146 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 C9orf163Q8N9P6 203 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 TMEM101Q96IK0 257 aa5.17□□□□□ -1.58
SMARCD1-207ENST00000549526 TRBV27A0A0K0K1C4 114 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 C7orf77A4D0Y5 90 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 F8W036 122 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 VCYO14598 125 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 MT-ND4LP03901 98 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 ZNF25P17030 456 aaPredicted RBP5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 SUMO2P61956 95 aaKnown RBP5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 PRR3P79522 188 aaKnown RBP5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 NRACQ8N912 160 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 OR5A1Q8NGJ0 315 aa5.16□□□□□ -1.58
SMARCD1-207ENST00000549526 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 hDV102S1A0JD36 115 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 LINC00862A6NCI5 91 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 GAGE12HA6NDE8 117 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 D6R8Y8 96 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 PRSS1P07477 247 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 ESDP10768 282 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 IFITM2Q01629 132 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 ANAPC16Q96DE5 110 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 KIR2DL4Q99706 377 aa5.15□□□□□ -1.59
SMARCD1-207ENST00000549526 TNFRSF6BO95407 300 aa5.14□□□□□ -1.59
SMARCD1-207ENST00000549526 ATP5L2Q7Z4Y8 100 aa5.14□□□□□ -1.59
SMARCD1-207ENST00000549526 CLRN3Q8NCR9 226 aa5.14□□□□□ -1.59
SMARCD1-207ENST00000549526 CHCHD10Q8WYQ3 142 aaPredicted RBP5.14□□□□□ -1.59
SMARCD1-207ENST00000549526 C20orf78Q9BR46 151 aa5.14□□□□□ -1.59
SMARCD1-207ENST00000549526 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
SMARCD1-207ENST00000549526 NPYP01303 97 aa5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 XCL1P47992 114 aa5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 SMAGPQ0VAQ4 97 aa5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 CIRBPQ14011 172 aaKnown RBP5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 CFAP161Q6P656 301 aa5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 UQCC3Q6UW78 93 aa5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 MRPL52Q86TS9 123 aaKnown RBP5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 TMEM18Q96B42 140 aa5.13□□□□□ -1.59
SMARCD1-207ENST00000549526 TRBV24-1A0A075B6N3 115 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 LINC00959A0A1B0GUT2 108 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 TMEM218A2RU14 115 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 CCL25O15444 150 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 PPBPP02775 128 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 CHTF8P0CG12 524 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 ADCYAP1P18509 176 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 SRSF9Q13242 221 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 SS18Q15532 418 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 HIGD2BQ4VC39 106 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 RNASE13Q5GAN3 156 aaKnown RBP5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 COMMD7Q86VX2 200 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 ORMDL3Q8N138 153 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 ZNF664Q8N3J9 261 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 PRELID3AQ96N28 172 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 SMIM2Q9BVW6 85 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 CDC42SE2Q9NRR3 84 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 UBE2D4Q9Y2X8 147 aa5.12□□□□□ -1.59
SMARCD1-207ENST00000549526 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.11□□□□□ -1.59
SMARCD1-207ENST00000549526 TCAPO15273 167 aa5.11□□□□□ -1.59
SMARCD1-207ENST00000549526 RPL32P62910 135 aaKnown RBP5.11□□□□□ -1.59
SMARCD1-207ENST00000549526 FOXI1Q12951 378 aa5.11□□□□□ -1.59
SMARCD1-207ENST00000549526 C15orf56Q8N910 161 aa5.11□□□□□ -1.59
SMARCD1-207ENST00000549526 PLAC8Q9NZF1 115 aa5.11□□□□□ -1.59
SMARCD1-207ENST00000549526 IGHV3-64A0A075B6Q5 118 aa5.1□□□□□ -1.59
SMARCD1-207ENST00000549526 TRAV13-1A0A0B4J241 112 aa5.1□□□□□ -1.59
SMARCD1-207ENST00000549526 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms