RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 WFDC10BQ8IUB3 73 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BHQ93079 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 RMI2Q96E14 147 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BNQ99877 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BMQ99879 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 DNAH6Q9C0G6 4158 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 TRAV8-3A0A0A6YYJ7 113 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 LCE6AA0A183 80 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 CCL25O15444 150 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 ATP5LO75964 103 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 S100A6P06703 90 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 FGF6P10767 208 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 MRPS36P82909 103 aaKnown RBP6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 GAGE6Q13070 117 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 C2orf66Q6UXQ4 117 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 NFE4Q86UQ8 179 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 TOMM6Q96B49 74 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 TMEM141Q96I45 108 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 PACRGQ96M98 296 aaPredicted RBP6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 DNAH1Q9P2D7 4330 aa6.67□□□□□ -1.34
SMARCD1-206ENST00000549274 LYSTQ99698 3801 aa6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 IGKV2-29A2NJV5 120 aaPredicted RBP6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 ANGP03950 147 aaKnown RBP6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 RBX1P62877 108 aa6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 COA6Q5JTJ3 125 aaKnown RBP6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 ERASQ7Z444 233 aa6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 C2orf88Q9BSF0 95 aa6.66□□□□□ -1.34
SMARCD1-206ENST00000549274 TRAV8-4A0A0B4J246 113 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 NBDYA0A0U1RRE5 68 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 SERF1AO75920 110 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 MIAQ16674 131 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 MPV17L2Q567V2 206 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
SMARCD1-206ENST00000549274 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 ZNF664Q8N3J9 261 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 C1orf43Q9BWL3 253 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 TM2D2Q9BX73 214 aa6.64□□□□□ -1.35
SMARCD1-206ENST00000549274 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 SEC11AP67812 179 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 TEX43Q6ZNM6 134 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 VCX2Q9H322 139 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 PRR34Q9NV39 138 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 KLK12Q9UKR0 248 aa6.63□□□□□ -1.35
SMARCD1-206ENST00000549274 LEPROTL1O95214 131 aa6.62□□□□□ -1.35
SMARCD1-206ENST00000549274 NDUFA6P56556 154 aa6.62□□□□□ -1.35
SMARCD1-206ENST00000549274 REG3AQ06141 175 aa6.62□□□□□ -1.35
SMARCD1-206ENST00000549274 SS18Q15532 418 aa6.62□□□□□ -1.35
SMARCD1-206ENST00000549274 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
SMARCD1-206ENST00000549274 URB1-AS1Q96HZ7 61 aa6.62□□□□□ -1.35
SMARCD1-206ENST00000549274 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 PRSS29PA6NIE9 313 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 IFITM10A6NMD0 228 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 S100A2P29034 98 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 AKR1D1P51857 326 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 PDZD11Q5EBL8 140 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 Q8N976 141 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 UBE2WQ96B02 151 aa6.61□□□□□ -1.35
SMARCD1-206ENST00000549274 PMVKQ15126 192 aa6.6□□□□□ -1.35
SMARCD1-206ENST00000549274 Q6ZR54 194 aa6.6□□□□□ -1.35
SMARCD1-206ENST00000549274 Q6ZUT4 128 aa6.6□□□□□ -1.35
SMARCD1-206ENST00000549274 C6orf223Q8N319 242 aa6.6□□□□□ -1.35
SMARCD1-206ENST00000549274 IFI27L1Q96BM0 104 aa6.6□□□□□ -1.35
SMARCD1-206ENST00000549274 A0A096LNJ9 63 aa6.59□□□□□ -1.35
SMARCD1-206ENST00000549274 PSCAO43653 123 aa6.59□□□□□ -1.35
SMARCD1-206ENST00000549274 C1orf134Q5TEV5 83 aa6.59□□□□□ -1.35
SMARCD1-206ENST00000549274 AMELXQ99217 191 aa6.59□□□□□ -1.35
SMARCD1-206ENST00000549274 MAP1LC3CQ9BXW4 147 aa6.59□□□□□ -1.35
SMARCD1-206ENST00000549274 KMT2AQ03164 3969 aa6.59□□□□□ -1.36
SMARCD1-206ENST00000549274 SACSQ9NZJ4 4579 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 IGKV2D-24A0A075B6R9 120 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 LINC00959A0A1B0GUT2 108 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 PRSS1P07477 247 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 LINC00310P59036 64 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 HERVK_113P63121 156 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 PMCHL1Q16048 86 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 Q9HAA7 133 aa6.58□□□□□ -1.36
SMARCD1-206ENST00000549274 M0R2N4 97 aa6.57□□□□□ -1.36
SMARCD1-206ENST00000549274 C14orf177Q52M58 125 aa6.57□□□□□ -1.36
SMARCD1-206ENST00000549274 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
SMARCD1-206ENST00000549274 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
SMARCD1-206ENST00000549274 BAALCQ8WXS3 180 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms