RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 ZNF56Q15929 161 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 SDIM1Q6ZPB5 146 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 TMEM61Q8N0U2 210 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 ZNF843Q8N446 348 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 SMIM20Q8N5G0 67 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 DCANP1Q8TF63 244 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 CLEC2BQ92478 149 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 VSIG2Q96IQ7 327 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 TIMM21Q9BVV7 248 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 IMUPQ9GZP8 106 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 TMEM126AQ9H061 195 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 YAE1D1Q9NRH1 226 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 LINC00527Q9UJ94 153 aa3.76□□□□□ -1.81
UBE2N-202ENST00000548946 SMG1Q96Q15 3661 aaKnown RBP3.76□□□□□ -1.81
UBE2N-202ENST00000548946 ACACAQ13085 2346 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 IGHV1OR15-1A0A075B7D0 117 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 TRAV8-3A0A0A6YYJ7 113 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 TINCRA0A1B0GVN0 87 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 A0A1W2PPR1 153 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 A6NDX4 124 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 IGHV3-11P01762 117 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 ACYP1P07311 99 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 COX6CP09669 75 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 LY6DQ14210 128 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 CHCHD5Q9BSY4 110 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 SPXQ9BT56 116 aa3.75□□□□□ -1.81
UBE2N-202ENST00000548946 BDP1A6H8Y1 2624 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 CD28P10747 220 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 PRRC2AP48634 2157 aaKnown RBP3.74□□□□□ -1.81
UBE2N-202ENST00000548946 FAM74A4Q5TZK3 123 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 TMEM101Q96IK0 257 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 CITED2Q99967 270 aaPredicted RBP3.74□□□□□ -1.81
UBE2N-202ENST00000548946 CHCHD7Q9BUK0 85 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 VPREB3Q9UKI3 123 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
UBE2N-202ENST00000548946 IGKV3-7A0A075B6H7 116 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 A8MZ25 164 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 K7EQG2 157 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 CCL21O00585 134 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 NDUFA1O15239 70 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 CEMP1Q6PRD7 247 aaPredicted RBP3.73□□□□□ -1.81
UBE2N-202ENST00000548946 C5orf38Q86SI9 138 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 C3orf22Q8N5N4 141 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 LINC00308Q8TCZ7 52 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 SMCR5Q8TEV8 140 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 PRORYQ9H606 182 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 DAZ1Q9NQZ3 744 aaKnown RBP3.73□□□□□ -1.81
UBE2N-202ENST00000548946 UBE2D4Q9Y2X8 147 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 TNRC18O15417 2968 aaPredicted RBP3.73□□□□□ -1.81
UBE2N-202ENST00000548946 GVINP1Q7Z2Y8 2422 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 ANKRD11Q6UB99 2663 aaPredicted RBP3.73□□□□□ -1.81
UBE2N-202ENST00000548946 SPTBN2O15020 2390 aa3.73□□□□□ -1.81
UBE2N-202ENST00000548946 TRAV12-2A0A075B6T6 113 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 IGHV3OR16-10A0A075B7F0 116 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 A8MTW9 85 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 COX7A2LO14548 114 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 DAND5Q8N907 189 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 DNAJC30Q96LL9 226 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 PPDPFQ9H3Y8 114 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 LOC400499M0QZD8 3231 aa3.72□□□□□ -1.81
UBE2N-202ENST00000548946 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 WDFY4Q6ZS81 3184 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 FAM236AA0A1B0GUQ0 79 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 FAM236BA0A1B0GV22 79 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 K7ENP7 123 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 UQCRQO14949 82 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 NDUFA7O95182 113 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 TRACP01848 142 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 ATP5G1P05496 136 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 RBMY1A1P0DJD3 496 aaKnown RBP3.71□□□□□ -1.82
UBE2N-202ENST00000548946 RBMY1CP0DJD4 496 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 CXCL5P42830 114 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 NPC2P61916 151 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 HIST1H4AP62805 103 aaKnown RBP3.71□□□□□ -1.82
UBE2N-202ENST00000548946 BLCAPP62952 87 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 RBMY1FQ15415 496 aaKnown RBP3.71□□□□□ -1.82
UBE2N-202ENST00000548946 LY6EQ16553 131 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 RNASE13Q5GAN3 156 aaKnown RBP3.71□□□□□ -1.82
UBE2N-202ENST00000548946 FAM222AQ5U5X8 452 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 SOSTDC1Q6X4U4 206 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 FAM19A3Q7Z5A8 133 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.71□□□□□ -1.82
UBE2N-202ENST00000548946 C3orf56Q8N813 242 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 NRGNQ92686 78 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 C2orf48Q96LS8 159 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 LINC00467Q9BRT7 94 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 BPESC1Q9GZL8 116 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 Q9UF83 564 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 KALRNO60229 2985 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 TLN1Q9Y490 2541 aaKnown RBP3.71□□□□□ -1.82
UBE2N-202ENST00000548946 ZFHX4Q86UP3 3567 aa3.71□□□□□ -1.82
UBE2N-202ENST00000548946 CFAP47Q6ZTR5 3102 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.7□□□□□ -1.82
UBE2N-202ENST00000548946 IGHV3-73A0A0B4J1V6 119 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 IGKV2-29A2NJV5 120 aaPredicted RBP3.7□□□□□ -1.82
UBE2N-202ENST00000548946 TMEM89A2RUT3 159 aa3.7□□□□□ -1.82
UBE2N-202ENST00000548946 BAALC-AS2P0C853 105 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms