RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 MAP1AP78559 2803 aaPredicted RBP-1.02□□□□□ -2.57
DEPDC4-205ENST00000548313 PAPPAQ13219 1627 aa-1.02□□□□□ -2.57
DEPDC4-205ENST00000548313 SMIM21Q3B7S5 101 aa-1.02□□□□□ -2.57
DEPDC4-205ENST00000548313 PIGYQ3MUY2 71 aa-1.02□□□□□ -2.57
DEPDC4-205ENST00000548313 C10orf128Q5T292 105 aa-1.02□□□□□ -2.57
DEPDC4-205ENST00000548313 PATJQ8NI35 1801 aa-1.02□□□□□ -2.57
DEPDC4-205ENST00000548313 DOCK2Q92608 1830 aa-1.03□□□□□ -2.57
DEPDC4-205ENST00000548313 ZNF236Q9UL36 1845 aa-1.03□□□□□ -2.57
DEPDC4-205ENST00000548313 SPAG11AQ6PDA7 123 aa-1.03□□□□□ -2.57
DEPDC4-205ENST00000548313 V9GYH0 126 aa-1.03□□□□□ -2.57
DEPDC4-205ENST00000548313 DOCK1Q14185 1865 aa-1.03□□□□□ -2.57
DEPDC4-205ENST00000548313 SBF2Q86WG5 1849 aa-1.03□□□□□ -2.57
DEPDC4-205ENST00000548313 FLNBO75369 2602 aaKnown RBP-1.03□□□□□ -2.58
DEPDC4-205ENST00000548313 GRIN2AQ12879 1464 aa-1.04□□□□□ -2.58
DEPDC4-205ENST00000548313 AMELXQ99217 191 aa-1.04□□□□□ -2.58
DEPDC4-205ENST00000548313 LRP1BQ9NZR2 4599 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 PPIP5K1Q6PFW1 1433 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 ARAP2Q8WZ64 1704 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 MT4P47944 62 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 TMEM170BQ5T4T1 132 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 C12orf73Q69YU5 71 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 DPH3Q96FX2 82 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 TSC2P49815 1807 aa-1.05□□□□□ -2.58
DEPDC4-205ENST00000548313 PRKDCP78527 4128 aaKnown RBP-1.06□□□□□ -2.58
DEPDC4-205ENST00000548313 NBEAL1Q6ZS30 2694 aa-1.06□□□□□ -2.58
DEPDC4-205ENST00000548313 CHD8Q9HCK8 2581 aa-1.06□□□□□ -2.58
DEPDC4-205ENST00000548313 TTC9CQ8N5M4 171 aa-1.06□□□□□ -2.58
DEPDC4-205ENST00000548313 COPS9Q8WXC6 57 aa-1.06□□□□□ -2.58
DEPDC4-205ENST00000548313 WDR7Q9Y4E6 1490 aa-1.06□□□□□ -2.58
DEPDC4-205ENST00000548313 KIF21AQ7Z4S6 1674 aa-1.07□□□□□ -2.58
DEPDC4-205ENST00000548313 Q6JHZ5 121 aa-1.07□□□□□ -2.58
DEPDC4-205ENST00000548313 MAFIPQ8WZ33 124 aa-1.07□□□□□ -2.58
DEPDC4-205ENST00000548313 RBM3P98179 157 aaKnown RBP-1.08□□□□□ -2.58
DEPDC4-205ENST00000548313 LINC00472Q9H8W2 130 aa-1.08□□□□□ -2.58
DEPDC4-205ENST00000548313 CFTRP13569 1480 aa-1.08□□□□□ -2.58
DEPDC4-205ENST00000548313 COX6B1P14854 86 aa-1.09□□□□□ -2.58
DEPDC4-205ENST00000548313 PDCD10Q9BUL8 212 aa-1.09□□□□□ -2.58
DEPDC4-205ENST00000548313 LAMA5O15230 3695 aa-1.09□□□□□ -2.58
DEPDC4-205ENST00000548313 UQCR11O14957 56 aa-1.1□□□□□ -2.59
DEPDC4-205ENST00000548313 HIST1H1DP16402 221 aaKnown RBP-1.1□□□□□ -2.59
DEPDC4-205ENST00000548313 Q8N8P6 123 aa-1.1□□□□□ -2.59
DEPDC4-205ENST00000548313 PFDN5Q99471 154 aa-1.1□□□□□ -2.59
DEPDC4-205ENST00000548313 NEBP20929 6669 aa-1.1□□□□□ -2.59
DEPDC4-205ENST00000548313 STAB2Q8WWQ8 2551 aa-1.1□□□□□ -2.59
DEPDC4-205ENST00000548313 APOC3P02656 99 aa-1.11□□□□□ -2.59
DEPDC4-205ENST00000548313 TPPP2P59282 170 aa-1.11□□□□□ -2.59
DEPDC4-205ENST00000548313 Q6AWC8 147 aa-1.11□□□□□ -2.59
DEPDC4-205ENST00000548313 BAGE2Q86Y30 109 aa-1.11□□□□□ -2.59
DEPDC4-205ENST00000548313 PAIP2BQ9ULR5 123 aaKnown RBP-1.11□□□□□ -2.59
DEPDC4-205ENST00000548313 RIMS1Q86UR5 1692 aaKnown RBP-1.11□□□□□ -2.59
DEPDC4-205ENST00000548313 LOC730098B7Z3J9 87 aa-1.12□□□□□ -2.59
DEPDC4-205ENST00000548313 SPRR1BP22528 89 aa-1.12□□□□□ -2.59
DEPDC4-205ENST00000548313 NDUFA4L2Q9NRX3 87 aa-1.12□□□□□ -2.59
DEPDC4-205ENST00000548313 GOLGA4Q13439 2230 aaKnown RBP-1.12□□□□□ -2.59
DEPDC4-205ENST00000548313 F8VRH5 84 aa-1.13□□□□□ -2.59
DEPDC4-205ENST00000548313 ARPC4P59998 168 aa-1.13□□□□□ -2.59
DEPDC4-205ENST00000548313 RERGLQ9H628 205 aa-1.13□□□□□ -2.59
DEPDC4-205ENST00000548313 URB1O60287 2271 aaKnown RBP-1.14□□□□□ -2.59
DEPDC4-205ENST00000548313 TNFP01375 233 aa-1.14□□□□□ -2.59
DEPDC4-205ENST00000548313 DEFB123Q8N688 67 aa-1.14□□□□□ -2.59
DEPDC4-205ENST00000548313 LSM10Q969L4 123 aaKnown RBP-1.14□□□□□ -2.59
DEPDC4-205ENST00000548313 MGST2Q99735 147 aa-1.14□□□□□ -2.59
DEPDC4-205ENST00000548313 SERP1Q9Y6X1 66 aa-1.14□□□□□ -2.59
DEPDC4-205ENST00000548313 UNC13AQ9UPW8 1703 aa-1.15□□□□□ -2.59
DEPDC4-205ENST00000548313 DYNLRB1Q9NP97 96 aa-1.15□□□□□ -2.59
DEPDC4-205ENST00000548313 SHANK2Q9UPX8 1470 aa-1.16□□□□□ -2.59
DEPDC4-205ENST00000548313 SNRNP25Q9BV90 132 aaKnown RBP-1.16□□□□□ -2.6
DEPDC4-205ENST00000548313 RAPGEF6Q8TEU7 1601 aa-1.16□□□□□ -2.6
DEPDC4-205ENST00000548313 KDM5AP29375 1690 aaKnown RBP-1.16□□□□□ -2.6
DEPDC4-205ENST00000548313 IGLC7A0M8Q6 106 aa-1.17□□□□□ -2.6
DEPDC4-205ENST00000548313 LINC01558Q9Y6Z2 57 aa-1.17□□□□□ -2.6
DEPDC4-205ENST00000548313 GAPVD1Q14C86 1478 aa-1.18□□□□□ -2.6
DEPDC4-205ENST00000548313 HIVEP1P15822 2718 aa-1.18□□□□□ -2.6
DEPDC4-205ENST00000548313 TRBV7-3A0A075B6L6 115 aa-1.18□□□□□ -2.6
DEPDC4-205ENST00000548313 CNOT1A5YKK6 2376 aaKnown RBP-1.19□□□□□ -2.6
DEPDC4-205ENST00000548313 DOPEY1Q5JWR5 2465 aa-1.19□□□□□ -2.6
DEPDC4-205ENST00000548313 NAA60Q9H7X0 242 aa-1.19□□□□□ -2.6
DEPDC4-205ENST00000548313 LOC285095A0A1B0GVY8 99 aa-1.2□□□□□ -2.6
DEPDC4-205ENST00000548313 SPINK4O60575 86 aa-1.2□□□□□ -2.6
DEPDC4-205ENST00000548313 DNAJC13O75165 2243 aa-1.2□□□□□ -2.6
DEPDC4-205ENST00000548313 ARHGEF12Q9NZN5 1544 aa-1.2□□□□□ -2.6
DEPDC4-205ENST00000548313 PKHD1P08F94 4074 aa-1.21□□□□□ -2.6
DEPDC4-205ENST00000548313 LOC105371267A0A1B0GV96 52 aa-1.21□□□□□ -2.6
DEPDC4-205ENST00000548313 HMGN4O00479 90 aa-1.21□□□□□ -2.6
DEPDC4-205ENST00000548313 PPP3R2Q96LZ3 170 aa-1.21□□□□□ -2.6
DEPDC4-205ENST00000548313 MYOM1P52179 1685 aa-1.21□□□□□ -2.6
DEPDC4-205ENST00000548313 BICRAQ9NZM4 1560 aa-1.21□□□□□ -2.6
DEPDC4-205ENST00000548313 FLGP20930 4061 aaPredicted RBP-1.22□□□□□ -2.6
DEPDC4-205ENST00000548313 POLA1P09884 1462 aaPredicted RBP-1.22□□□□□ -2.6
DEPDC4-205ENST00000548313 RYR3Q15413 4870 aa-1.22□□□□□ -2.61
DEPDC4-205ENST00000548313 CPSF1Q10570 1443 aaKnown RBP-1.23□□□□□ -2.61
DEPDC4-205ENST00000548313 PSME4Q14997 1843 aa-1.23□□□□□ -2.61
DEPDC4-205ENST00000548313 SELENOWP63302 87 aa-1.23□□□□□ -2.61
DEPDC4-205ENST00000548313 ARL11Q969Q4 196 aa-1.23□□□□□ -2.61
DEPDC4-205ENST00000548313 USH2AO75445 5202 aa-1.23□□□□□ -2.61
DEPDC4-205ENST00000548313 TULP4Q9NRJ4 1543 aa-1.24□□□□□ -2.61
DEPDC4-205ENST00000548313 SFT2D2O95562 160 aa-1.24□□□□□ -2.61
DEPDC4-205ENST00000548313 PHLPP1O60346 1717 aa-1.25□□□□□ -2.61
DEPDC4-205ENST00000548313 FAM25AB3EWG3 89 aa-1.25□□□□□ -2.61
DEPDC4-205ENST00000548313 FAM25CB3EWG5 89 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms