RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 AKAIN1P0CW23 69 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 C5orf38Q86SI9 138 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 NDUFA4L2Q9NRX3 87 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 RYR3Q15413 4870 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 ABCA13Q86UQ4 5058 aa0.03□□□□□ -2.4
RPAP3-206ENST00000548296 TNFP01375 233 aa0.03□□□□□ -2.4
RPAP3-206ENST00000548296 SARNPP82979 210 aaKnown RBP0.03□□□□□ -2.4
RPAP3-206ENST00000548296 COMMD6Q7Z4G1 85 aa0.03□□□□□ -2.4
RPAP3-206ENST00000548296 PRO0255Q9UI72 69 aa0.03□□□□□ -2.4
RPAP3-206ENST00000548296 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.4
RPAP3-206ENST00000548296 PSME4Q14997 1843 aa0.03□□□□□ -2.4
RPAP3-206ENST00000548296 LRP6O75581 1613 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 LAMC1P11047 1609 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 SHROOM2Q13796 1616 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 SPTBN2O15020 2390 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
RPAP3-206ENST00000548296 SBF2Q86WG5 1849 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 PTPN13Q12923 2485 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 LINC00472Q9H8W2 130 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 DYNLRB1Q9NP97 96 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 NHSL1Q5SYE7 1610 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 KIF21AQ7Z4S6 1674 aa0.02□□□□□ -2.41
RPAP3-206ENST00000548296 RIMS1Q86UR5 1692 aaKnown RBP0.02□□□□□ -2.41
RPAP3-206ENST00000548296 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
RPAP3-206ENST00000548296 DLEU1O43261 78 aa0.01□□□□□ -2.41
RPAP3-206ENST00000548296 COX17Q14061 63 aa0.01□□□□□ -2.41
RPAP3-206ENST00000548296 SPCS1Q9Y6A9 102 aa0.01□□□□□ -2.41
RPAP3-206ENST00000548296 KTN1Q86UP2 1357 aaKnown RBP0.01□□□□□ -2.41
RPAP3-206ENST00000548296 ROBO1Q9Y6N7 1651 aa0.01□□□□□ -2.41
RPAP3-206ENST00000548296 HERC1Q15751 4861 aa0□□□□□ -2.41
RPAP3-206ENST00000548296 OOSP1A8MZH6 123 aa0□□□□□ -2.41
RPAP3-206ENST00000548296 UQCR11O14957 56 aa0□□□□□ -2.41
RPAP3-206ENST00000548296 TPPP2P59282 170 aa0□□□□□ -2.41
RPAP3-206ENST00000548296 EP300Q09472 2414 aaPredicted RBP0□□□□□ -2.41
RPAP3-206ENST00000548296 DOPEY1Q5JWR5 2465 aa0□□□□□ -2.41
RPAP3-206ENST00000548296 BAGE2Q86Y30 109 aa0□□□□□ -2.41
RPAP3-206ENST00000548296 CREBBPQ92793 2442 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 C2CD3Q4AC94 2353 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 CUL7Q14999 1698 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 VWFP04275 2813 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 ZNF292O60281 2723 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 BSNQ9UPA5 3926 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 F8VRH5 84 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 BCE1O60756 84 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 HAMPP81172 84 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 TMEM170BQ5T4T1 132 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 MRPL54Q6P161 138 aaKnown RBP-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 TSLPQ969D9 159 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 LINC01558Q9Y6Z2 57 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 TCHHQ07283 1943 aa-0.01□□□□□ -2.41
RPAP3-206ENST00000548296 PKD1L2Q7Z442 2459 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 CSMD3Q7Z407 3707 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 EPPK1P58107 5090 aaKnown RBP-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 TEP1Q99973 2627 aaKnown RBP-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 HECTD1Q9ULT8 2610 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 A0A1B0GV90 55 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 LOC285095A0A1B0GVY8 99 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 IFITM1P13164 125 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 S100A3P33764 101 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 PLCE1Q9P212 2302 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 MYOM1P52179 1685 aa-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
RPAP3-206ENST00000548296 MYOM2P54296 1465 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 ACANP16112 2415 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 SETD2Q9BYW2 2564 aaPredicted RBP-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 TRAV22A0A0B4J277 110 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 IGLC7A0M8Q6 106 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 M0R3E3 92 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 HMGN4O00479 90 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 APOC3P02656 99 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 WFDC2Q14508 124 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 WNK2Q9Y3S1 2297 aa-0.03□□□□□ -2.41
RPAP3-206ENST00000548296 CFDP00746 253 aaPredicted RBP-0.04□□□□□ -2.42
RPAP3-206ENST00000548296 C9orf153Q5TBE3 101 aa-0.04□□□□□ -2.42
RPAP3-206ENST00000548296 MYOZ3Q8TDC0 251 aa-0.04□□□□□ -2.42
RPAP3-206ENST00000548296 LINC00474Q9P2X8 69 aa-0.04□□□□□ -2.42
RPAP3-206ENST00000548296 IER3IP1Q9Y5U9 82 aa-0.04□□□□□ -2.42
RPAP3-206ENST00000548296 ERCC6L2Q5T890 1561 aa-0.04□□□□□ -2.42
RPAP3-206ENST00000548296 FASNP49327 2511 aaKnown RBP-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 UBE2L5PA0A1B0GUS4 154 aa-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 UBE2L3P68036 154 aaKnown RBP-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 Q5VSD8 79 aa-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 Q8IZM0 81 aa-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 USH2AO75445 5202 aa-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 RAPGEF6Q8TEU7 1601 aa-0.05□□□□□ -2.42
RPAP3-206ENST00000548296 DOPEY2Q9Y3R5 2298 aa-0.06□□□□□ -2.42
RPAP3-206ENST00000548296 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
RPAP3-206ENST00000548296 DPH3P1Q9H4G8 78 aa-0.06□□□□□ -2.42
RPAP3-206ENST00000548296 TP53AIP1Q9HCN2 124 aa-0.06□□□□□ -2.42
RPAP3-206ENST00000548296 SMG6Q86US8 1419 aaKnown RBP-0.06□□□□□ -2.42
RPAP3-206ENST00000548296 ABCA2Q9BZC7 2435 aa-0.06□□□□□ -2.42
RPAP3-206ENST00000548296 MYO7BQ6PIF6 2116 aa-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 ATP5EP56381 51 aaPredicted RBP-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 Q6JHZ5 121 aa-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 PTPRQQ9UMZ3 2332 aa-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 COL6A5A8TX70 2615 aa-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 EIF4G3O43432 1585 aaKnown RBP-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 TENM4Q6N022 2769 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms