RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 MUC7Q8TAX7 377 aa4.34□□□□□ -1.71
PTPRR-207ENST00000548220 KIR2DL4Q99706 377 aa4.34□□□□□ -1.71
PTPRR-207ENST00000548220 MAP1LC3AQ9H492 121 aa4.34□□□□□ -1.71
PTPRR-207ENST00000548220 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
PTPRR-207ENST00000548220 HSPB8Q9UJY1 196 aa4.34□□□□□ -1.71
PTPRR-207ENST00000548220 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 SYS1-DBNDD2H3BUS1 97 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 Q8N8P6 123 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 ATP6V0E2Q8NHE4 81 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 CHCHD7Q9BUK0 85 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 SNHG12Q9BXW3 62 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 MAP1LC3CQ9BXW4 147 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 UQCR10Q9UDW1 63 aa4.33□□□□□ -1.72
PTPRR-207ENST00000548220 IGLV2-18A0A075B6J9 118 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 A0A096LPF7 62 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 NPYP01303 97 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 IFI27P40305 119 aaPredicted RBP4.32□□□□□ -1.72
PTPRR-207ENST00000548220 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 SPATA12Q7Z6I5 190 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 ZNRF2Q8NHG8 242 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 SMIM2Q9BVW6 85 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 CSDC2Q9Y534 153 aaKnown RBP4.32□□□□□ -1.72
PTPRR-207ENST00000548220 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
PTPRR-207ENST00000548220 DNAH7Q8WXX0 4024 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 TRAV26-2A0A0B4J265 109 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 A0A1B0GV90 55 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 SMKR1H3BMG3 65 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 P0DMU3 169 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 FAM231AP0DMU4 169 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 FAM231CP0DMU5 169 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 CCL18P55774 89 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 COTL1Q14019 142 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 UPK3BQ9BT76 320 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
PTPRR-207ENST00000548220 TRBV25-1A0A075B6N4 114 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 A0A096LNJ9 63 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 HSBP1L1C9JCN9 74 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 CCL25O15444 150 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 HBDP02042 147 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 HTN3P15516 51 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 ZNF25P17030 456 aaPredicted RBP4.3□□□□□ -1.72
PTPRR-207ENST00000548220 HNRNPA3P51991 378 aaKnown RBP4.3□□□□□ -1.72
PTPRR-207ENST00000548220 LAGE3Q14657 143 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 LELP1Q5T871 98 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 Q6ZN92 141 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 RPL39LQ96EH5 51 aaKnown RBP4.3□□□□□ -1.72
PTPRR-207ENST00000548220 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 PYGO1Q9Y3Y4 419 aa4.3□□□□□ -1.72
PTPRR-207ENST00000548220 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 IGLL5B9A064 214 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 TSHBP01222 138 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 SLPIP03973 132 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 FCER1GP30273 86 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 GAGE1Q13065 139 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 GAGE4Q13068 117 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 GAGE5Q13069 117 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 PAPPA-AS1Q5QFB9 102 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 LGALS9CQ6DKI2 356 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
PTPRR-207ENST00000548220 MRPS16Q9Y3D3 137 aaKnown RBP4.29□□□□□ -1.72
PTPRR-207ENST00000548220 A0A0J9YY99 117 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 hDV102S1A0JD36 115 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 Q8N1X5 172 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 Q9UF83 564 aa4.28□□□□□ -1.72
PTPRR-207ENST00000548220 DYNC2H1Q8NCM8 4307 aaKnown RBP4.28□□□□□ -1.72
PTPRR-207ENST00000548220 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 H0Y8G0 127 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 ATP5LO75964 103 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 NUDT3O95989 172 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 GCSHP23434 173 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 PTTG1IPP53801 180 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
PTPRR-207ENST00000548220 ESRGQ1W209 222 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 CASC10Q5T4H9 136 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 ERASQ7Z444 233 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 LINC00469Q8N7U9 141 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 TOMM6Q96B49 74 aa4.27□□□□□ -1.73
PTPRR-207ENST00000548220 TMEM141Q96I45 108 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms