RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 CNFNQ9BYD5 112 aa5.01□□□□□ -1.61
PTCH1-214ENST00000547615 C19orf71A6NCJ1 209 aa5□□□□□ -1.61
PTCH1-214ENST00000547615 COX7A2LO14548 114 aa5□□□□□ -1.61
PTCH1-214ENST00000547615 CTRLP40313 264 aa5□□□□□ -1.61
PTCH1-214ENST00000547615 RPL35P42766 123 aaKnown RBP5□□□□□ -1.61
PTCH1-214ENST00000547615 RPL18AQ02543 176 aaKnown RBP5□□□□□ -1.61
PTCH1-214ENST00000547615 MRPL52Q86TS9 123 aaKnown RBP5□□□□□ -1.61
PTCH1-214ENST00000547615 C9orf62Q8N4C0 152 aa5□□□□□ -1.61
PTCH1-214ENST00000547615 KCNRGQ8N5I3 272 aa5□□□□□ -1.61
PTCH1-214ENST00000547615 SFT2D1Q8WV19 159 aa5□□□□□ -1.61
PTCH1-214ENST00000547615 LPAP08519 4548 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.99□□□□□ -1.61
PTCH1-214ENST00000547615 FXYD6-FXYD2A0A087WZ82 144 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 IGKV2-29A2NJV5 120 aaPredicted RBP4.99□□□□□ -1.61
PTCH1-214ENST00000547615 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 PMCHP20382 165 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 GNG4P50150 75 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 IFITM2Q01629 132 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 TWIST1Q15672 202 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 OR10D4PQ8NGN7 298 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 MBD3L1Q8WWY6 194 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 C11orf52Q96A22 123 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 ALG5Q9Y673 324 aa4.99□□□□□ -1.61
PTCH1-214ENST00000547615 A0A087WZ39 114 aa4.98□□□□□ -1.61
PTCH1-214ENST00000547615 G3V3Q6 166 aa4.98□□□□□ -1.61
PTCH1-214ENST00000547615 CENPWQ5EE01 88 aa4.98□□□□□ -1.61
PTCH1-214ENST00000547615 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
PTCH1-214ENST00000547615 LYZL1Q6UWQ5 148 aa4.98□□□□□ -1.61
PTCH1-214ENST00000547615 MRPL35Q9NZE8 188 aaKnown RBP4.98□□□□□ -1.61
PTCH1-214ENST00000547615 CSDC2Q9Y534 153 aaKnown RBP4.98□□□□□ -1.61
PTCH1-214ENST00000547615 TRBV6-5A0A0K0K1A5 114 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 A0A1W2PNN7 141 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 C7orf77A4D0Y5 90 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
PTCH1-214ENST00000547615 NDUFA1O15239 70 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 BCL2L11O43521 198 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 PDE6DO43924 150 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 PPP1R17O96001 155 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 H2AFB1P0C5Y9 115 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 BCL2P10415 239 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 CCL20P78556 96 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 MEF2BQ02080 365 aaPredicted RBP4.97□□□□□ -1.61
PTCH1-214ENST00000547615 TMEM241Q24JQ0 296 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 SLC7A5P1Q8MH63 180 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 GATD1Q8NB37 220 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 FAM213BQ8TBF2 198 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 TMEM18Q96B42 140 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 CDC42SE2Q9NRR3 84 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 MUC2Q02817 5179 aa4.97□□□□□ -1.61
PTCH1-214ENST00000547615 LOC105371267A0A1B0GV96 52 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 TLX1NBP0CAT3 122 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 TAGLN2P37802 199 aaKnown RBP4.96□□□□□ -1.62
PTCH1-214ENST00000547615 UBE2BP63146 152 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 CTAG1AP78358 180 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 IFITM3Q01628 133 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 SPAG11BQ08648 103 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 ZNF345Q14585 488 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 PHF5AQ7RTV0 110 aaKnown RBP4.96□□□□□ -1.62
PTCH1-214ENST00000547615 BORCS7Q96B45 105 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 LINC00526Q96FQ7 95 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 ST20Q9HBF5 79 aa4.96□□□□□ -1.62
PTCH1-214ENST00000547615 RAB19A4D1S5 217 aa4.95□□□□□ -1.62
PTCH1-214ENST00000547615 TCAPO15273 167 aa4.95□□□□□ -1.62
PTCH1-214ENST00000547615 NUPR1O60356 82 aa4.95□□□□□ -1.62
PTCH1-214ENST00000547615 KRTAP1-4P0C5Y4 121 aa4.95□□□□□ -1.62
PTCH1-214ENST00000547615 TRBV27A0A0K0K1C4 114 aa4.94□□□□□ -1.62
PTCH1-214ENST00000547615 ARPC5O15511 151 aa4.94□□□□□ -1.62
PTCH1-214ENST00000547615 RPL39LQ96EH5 51 aaKnown RBP4.94□□□□□ -1.62
PTCH1-214ENST00000547615 RPP21Q9H633 154 aaKnown RBP4.94□□□□□ -1.62
PTCH1-214ENST00000547615 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 KANTRA0A1W2PQU2 76 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 M0QXV9 152 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 FCER1GP30273 86 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 AKAP14Q86UN6 197 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 KIR2DL4Q99706 377 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 CYTL1Q9NRR1 136 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 GNG13Q9P2W3 67 aa4.93□□□□□ -1.62
PTCH1-214ENST00000547615 A0A1B0GV50 99 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 PPP1R2P9O14990 202 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 ZNF861PO60384 105 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 TSHBP01222 138 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 SLC51BQ86UW2 128 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 TIMM21Q9BVV7 248 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 TMEM242Q9NWH2 141 aa4.92□□□□□ -1.62
PTCH1-214ENST00000547615 TRBV30A0A0K0K1B3 111 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 A8MWL6 223 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 VCYO14598 125 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 CRYGAP11844 174 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 Q5BKY6 102 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 CT83Q5H943 113 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 FAM19A5Q7Z5A7 132 aaPredicted RBP4.91□□□□□ -1.62
PTCH1-214ENST00000547615 NUDT10Q8NFP7 164 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 ORAOV1Q8WV07 137 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 NUDT11Q96G61 164 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 SMDT1Q9H4I9 107 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 MED9Q9NWA0 146 aa4.91□□□□□ -1.62
PTCH1-214ENST00000547615 TRAV13-1A0A0B4J241 112 aa4.9□□□□□ -1.63
PTCH1-214ENST00000547615 RPL28P46779 137 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms