RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SFTA2Q6UW10 78 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
BRF1-212ENST00000547562 C19orf73Q9NVV2 129 aa11.12□□□□□ -0.63
BRF1-212ENST00000547562 PRO1854Q9UHT4 67 aa11.12□□□□□ -0.63
BRF1-212ENST00000547562 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
BRF1-212ENST00000547562 LYRM7Q5U5X0 104 aa11.11□□□□□ -0.63
BRF1-212ENST00000547562 MTURNQ8N3F0 131 aa11.11□□□□□ -0.63
BRF1-212ENST00000547562 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
BRF1-212ENST00000547562 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
BRF1-212ENST00000547562 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
BRF1-212ENST00000547562 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
BRF1-212ENST00000547562 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
BRF1-212ENST00000547562 MUSTN1Q8IVN3 82 aa11.11□□□□□ -0.63
BRF1-212ENST00000547562 NDUFA7O95182 113 aa11.1□□□□□ -0.63
BRF1-212ENST00000547562 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
BRF1-212ENST00000547562 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
BRF1-212ENST00000547562 ETDBQ3ZM63 59 aa11.1□□□□□ -0.63
BRF1-212ENST00000547562 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
BRF1-212ENST00000547562 LITAFQ99732 161 aa11.1□□□□□ -0.63
BRF1-212ENST00000547562 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
BRF1-212ENST00000547562 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
BRF1-212ENST00000547562 PSMB2P49721 201 aa11.09□□□□□ -0.63
BRF1-212ENST00000547562 SH2D6Q7Z4S9 175 aa11.09□□□□□ -0.63
BRF1-212ENST00000547562 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
BRF1-212ENST00000547562 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
BRF1-212ENST00000547562 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
BRF1-212ENST00000547562 TIRAPP58753 221 aa11.09□□□□□ -0.63
BRF1-212ENST00000547562 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 CDKN2A-AS1Q9UH64 79 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 A8MZ25 164 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 LINC00694P0DN24 101 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 NTM-AS1Q6ZSK4 140 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
BRF1-212ENST00000547562 FASNP49327 2511 aaKnown RBP11.08□□□□□ -0.64
BRF1-212ENST00000547562 ZFAND6Q6FIF0 208 aa11.07□□□□□ -0.64
BRF1-212ENST00000547562 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
BRF1-212ENST00000547562 GAGE12JA6NER3 117 aa11.07□□□□□ -0.64
BRF1-212ENST00000547562 GAGE4Q13068 117 aa11.07□□□□□ -0.64
BRF1-212ENST00000547562 GAGE5Q13069 117 aa11.07□□□□□ -0.64
BRF1-212ENST00000547562 CSDC2Q9Y534 153 aaKnown RBP11.07□□□□□ -0.64
BRF1-212ENST00000547562 TRBV20-1A0A075B6N2 111 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 IGHV3-33P01772 117 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.06□□□□□ -0.64
BRF1-212ENST00000547562 C2CD3Q4AC94 2353 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 TCL1BO95988 128 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 SMR3AQ99954 134 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 SPANXCQ9NY87 97 aa11.06□□□□□ -0.64
BRF1-212ENST00000547562 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 GAGE7O76087 117 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
BRF1-212ENST00000547562 COX6A2Q02221 97 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 ADAMTSL4-AS1Q5T5F5 129 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 J3QR89 54 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 HERVK_113P63121 156 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 TMEM101Q96IK0 257 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
BRF1-212ENST00000547562 FAM19A3Q7Z5A8 133 aa11.04□□□□□ -0.64
BRF1-212ENST00000547562 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
BRF1-212ENST00000547562 PRSS2P07478 247 aa11.04□□□□□ -0.64
BRF1-212ENST00000547562 SCGB1C2P0DMR2 95 aa11.04□□□□□ -0.64
BRF1-212ENST00000547562 MIAQ16674 131 aa11.04□□□□□ -0.64
BRF1-212ENST00000547562 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
BRF1-212ENST00000547562 KRTAP10-3P60369 221 aa11.03□□□□□ -0.64
BRF1-212ENST00000547562 TRBV6-4A0A1B0GX49 114 aa11.02□□□□□ -0.65
BRF1-212ENST00000547562 NDUFA1O15239 70 aa11.02□□□□□ -0.65
BRF1-212ENST00000547562 SMAGPQ0VAQ4 97 aa11.02□□□□□ -0.65
BRF1-212ENST00000547562 CDC42SE2Q9NRR3 84 aa11.02□□□□□ -0.65
BRF1-212ENST00000547562 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
BRF1-212ENST00000547562 H7C2G1 150 aa11.01□□□□□ -0.65
BRF1-212ENST00000547562 TIMM17BO60830 172 aa11.01□□□□□ -0.65
BRF1-212ENST00000547562 ATP6V0E2Q8NHE4 81 aa11.01□□□□□ -0.65
BRF1-212ENST00000547562 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
BRF1-212ENST00000547562 LOC100131303A0A0U1RQF7 123 aa11□□□□□ -0.65
BRF1-212ENST00000547562 TMEM243Q9BU79 118 aa11□□□□□ -0.65
BRF1-212ENST00000547562 TRGV4A0A0C4DH28 118 aa11□□□□□ -0.65
BRF1-212ENST00000547562 PF4P02776 101 aa11□□□□□ -0.65
BRF1-212ENST00000547562 INSL3P51460 131 aa11□□□□□ -0.65
BRF1-212ENST00000547562 UBE2L6O14933 153 aa10.99□□□□□ -0.65
BRF1-212ENST00000547562 Q1RN00 199 aa10.99□□□□□ -0.65
BRF1-212ENST00000547562 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
BRF1-212ENST00000547562 LINC00482Q8N8I6 264 aa10.99□□□□□ -0.65
BRF1-212ENST00000547562 SMIM1B2RUZ4 78 aa10.98□□□□□ -0.65
BRF1-212ENST00000547562 RNF183Q96D59 192 aa10.98□□□□□ -0.65
BRF1-212ENST00000547562 NPC2P61916 151 aa10.98□□□□□ -0.65
BRF1-212ENST00000547562 FOXI1Q12951 378 aa10.98□□□□□ -0.65
BRF1-212ENST00000547562 LY6G6DO95868 133 aa10.97□□□□□ -0.65
BRF1-212ENST00000547562 IFITM1P13164 125 aa10.97□□□□□ -0.65
BRF1-212ENST00000547562 FHL2Q14192 279 aa10.97□□□□□ -0.65
BRF1-212ENST00000547562 Q9H8V8 135 aa10.97□□□□□ -0.65
BRF1-212ENST00000547562 H7C423 109 aa10.97□□□□□ -0.65
BRF1-212ENST00000547562 FN1P02751 2386 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms