RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 Q6ZRN7 208 aaPredicted RBP11.99□□□□□ -0.49
BRF1-209ENST00000547052 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
BRF1-209ENST00000547052 SS18Q15532 418 aa11.98□□□□□ -0.49
BRF1-209ENST00000547052 C14orf177Q52M58 125 aa11.98□□□□□ -0.49
BRF1-209ENST00000547052 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
BRF1-209ENST00000547052 Q6ZN92 141 aa11.98□□□□□ -0.49
BRF1-209ENST00000547052 UBE2D4Q9Y2X8 147 aa11.98□□□□□ -0.49
BRF1-209ENST00000547052 CCL25O15444 150 aa11.97□□□□□ -0.49
BRF1-209ENST00000547052 YPEL4Q96NS1 127 aa11.97□□□□□ -0.49
BRF1-209ENST00000547052 RPL39P62891 51 aaKnown RBP11.96□□□□□ -0.49
BRF1-209ENST00000547052 C2orf66Q6UXQ4 117 aa11.96□□□□□ -0.49
BRF1-209ENST00000547052 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.49
BRF1-209ENST00000547052 AP5S1Q9NUS5 200 aa11.96□□□□□ -0.49
BRF1-209ENST00000547052 IGLV10-54A0A075B6I4 117 aa11.95□□□□□ -0.5
BRF1-209ENST00000547052 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
BRF1-209ENST00000547052 A0A087WTM6 91 aa11.94□□□□□ -0.5
BRF1-209ENST00000547052 PYGO1Q9Y3Y4 419 aa11.94□□□□□ -0.5
BRF1-209ENST00000547052 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
BRF1-209ENST00000547052 NPSP0C0P6 89 aa11.93□□□□□ -0.5
BRF1-209ENST00000547052 MRPS36P82909 103 aaKnown RBP11.93□□□□□ -0.5
BRF1-209ENST00000547052 C18orf32Q8TCD1 76 aa11.93□□□□□ -0.5
BRF1-209ENST00000547052 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
BRF1-209ENST00000547052 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
BRF1-209ENST00000547052 TEX43Q6ZNM6 134 aa11.92□□□□□ -0.5
BRF1-209ENST00000547052 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
BRF1-209ENST00000547052 IFITM10A6NMD0 228 aa11.91□□□□□ -0.5
BRF1-209ENST00000547052 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
BRF1-209ENST00000547052 TRGC2P03986 189 aa11.91□□□□□ -0.5
BRF1-209ENST00000547052 LINC00614P0C842 121 aa11.91□□□□□ -0.5
BRF1-209ENST00000547052 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
BRF1-209ENST00000547052 Q6ZUT4 128 aa11.91□□□□□ -0.5
BRF1-209ENST00000547052 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 TRAV13-1A0A0B4J241 112 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 LINC00959A0A1B0GUT2 108 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 RYR3Q15413 4870 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
BRF1-209ENST00000547052 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 TOMM6Q96B49 74 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 VCX2Q9H322 139 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 PGPEP1Q9NXJ5 209 aa11.9□□□□□ -0.5
BRF1-209ENST00000547052 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
BRF1-209ENST00000547052 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
BRF1-209ENST00000547052 COLCA2A8K830 154 aa11.89□□□□□ -0.51
BRF1-209ENST00000547052 SCO1O75880 301 aa11.89□□□□□ -0.51
BRF1-209ENST00000547052 XCL1P47992 114 aa11.89□□□□□ -0.51
BRF1-209ENST00000547052 TIMM17AQ99595 171 aa11.89□□□□□ -0.51
BRF1-209ENST00000547052 RNASE13Q5GAN3 156 aaKnown RBP11.88□□□□□ -0.51
BRF1-209ENST00000547052 Q8N814 137 aa11.88□□□□□ -0.51
BRF1-209ENST00000547052 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
BRF1-209ENST00000547052 A0A1B0GVY2 172 aa11.87□□□□□ -0.51
BRF1-209ENST00000547052 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
BRF1-209ENST00000547052 LECT2O14960 151 aa11.87□□□□□ -0.51
BRF1-209ENST00000547052 HBDP02042 147 aa11.87□□□□□ -0.51
BRF1-209ENST00000547052 MALP21145 153 aa11.87□□□□□ -0.51
BRF1-209ENST00000547052 ERASQ7Z444 233 aa11.87□□□□□ -0.51
BRF1-209ENST00000547052 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
BRF1-209ENST00000547052 C16orf90A8MZG2 172 aa11.86□□□□□ -0.51
BRF1-209ENST00000547052 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
BRF1-209ENST00000547052 CD164L2Q6UWJ8 174 aa11.86□□□□□ -0.51
BRF1-209ENST00000547052 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
BRF1-209ENST00000547052 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
BRF1-209ENST00000547052 HSBP1O75506 76 aa11.85□□□□□ -0.51
BRF1-209ENST00000547052 SEC11AP67812 179 aa11.85□□□□□ -0.51
BRF1-209ENST00000547052 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
BRF1-209ENST00000547052 COX7A2LO14548 114 aa11.84□□□□□ -0.51
BRF1-209ENST00000547052 APOMO95445 188 aa11.84□□□□□ -0.51
BRF1-209ENST00000547052 ATP5LO75964 103 aa11.83□□□□□ -0.52
BRF1-209ENST00000547052 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
BRF1-209ENST00000547052 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
BRF1-209ENST00000547052 hDV102S1A0JD36 115 aa11.82□□□□□ -0.52
BRF1-209ENST00000547052 IGIPA6NJ69 53 aa11.82□□□□□ -0.52
BRF1-209ENST00000547052 MAPKAPK5-AS1Q8N8E1 139 aa11.82□□□□□ -0.52
BRF1-209ENST00000547052 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
BRF1-209ENST00000547052 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
BRF1-209ENST00000547052 DNAH2Q9P225 4427 aa11.81□□□□□ -0.52
BRF1-209ENST00000547052 FOXI1Q12951 378 aa11.8□□□□□ -0.52
BRF1-209ENST00000547052 KRTAP26-1Q6PEX3 210 aa11.8□□□□□ -0.52
BRF1-209ENST00000547052 GEMIN7Q9H840 131 aaKnown RBP11.8□□□□□ -0.52
BRF1-209ENST00000547052 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
BRF1-209ENST00000547052 NDUFA6P56556 154 aa11.79□□□□□ -0.52
BRF1-209ENST00000547052 AMELXQ99217 191 aa11.79□□□□□ -0.52
BRF1-209ENST00000547052 GCSHP23434 173 aa11.78□□□□□ -0.52
BRF1-209ENST00000547052 KRTAP10-2P60368 255 aa11.78□□□□□ -0.52
BRF1-209ENST00000547052 HERVK_113P63121 156 aa11.78□□□□□ -0.52
BRF1-209ENST00000547052 PMVKQ15126 192 aa11.78□□□□□ -0.52
BRF1-209ENST00000547052 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
BRF1-209ENST00000547052 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
BRF1-209ENST00000547052 UBE2D1P51668 147 aa11.77□□□□□ -0.53
BRF1-209ENST00000547052 WFDC2Q14508 124 aa11.77□□□□□ -0.53
BRF1-209ENST00000547052 PMCHL1Q16048 86 aa11.77□□□□□ -0.53
BRF1-209ENST00000547052 C5orf38Q86SI9 138 aa11.76□□□□□ -0.53
BRF1-209ENST00000547052 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
BRF1-209ENST00000547052 PACRGQ96M98 296 aaPredicted RBP11.76□□□□□ -0.53
BRF1-209ENST00000547052 SERF1AO75920 110 aa11.75□□□□□ -0.53
BRF1-209ENST00000547052 PRSS1P07477 247 aa11.75□□□□□ -0.53
BRF1-209ENST00000547052 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
BRF1-209ENST00000547052 HIGD2BQ4VC39 106 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms