RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.14□□□□□ -0.95
SCAF11-209ENST00000547018 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
SCAF11-209ENST00000547018 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
SCAF11-209ENST00000547018 K7ERU9 68 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 H3BRM9 83 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 GAGE6Q13070 117 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 C12orf74Q32Q52 190 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 SIVA1O15304 175 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 RHOHQ15669 191 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 CLPSL2Q6UWE3 100 aa9.13□□□□□ -0.95
SCAF11-209ENST00000547018 A0A0J9YY99 117 aa9.12□□□□□ -0.95
SCAF11-209ENST00000547018 LINC01549A6NIU2 74 aa9.12□□□□□ -0.95
SCAF11-209ENST00000547018 TMEM263Q8WUH6 116 aaKnown RBP9.12□□□□□ -0.95
SCAF11-209ENST00000547018 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
SCAF11-209ENST00000547018 RHODO00212 210 aa9.12□□□□□ -0.95
SCAF11-209ENST00000547018 ZNF22P17026 224 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-209ENST00000547018 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 TMEM262E9PQX1 116 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 A0A1W2PPM0 123 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 H3BMG7 143 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 UBE2L6O14933 153 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 CHCHD5Q9BSY4 110 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 C16orf95Q9H693 158 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 TOMM7Q9P0U1 55 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 CHCHD7Q9BUK0 85 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
SCAF11-209ENST00000547018 Q1RN00 199 aa9.1□□□□□ -0.95
SCAF11-209ENST00000547018 C11orf68Q9H3H3 251 aaKnown RBP9.1□□□□□ -0.95
SCAF11-209ENST00000547018 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
SCAF11-209ENST00000547018 A0A1B0GV72 72 aa9.1□□□□□ -0.95
SCAF11-209ENST00000547018 K7EQD1 137 aa9.1□□□□□ -0.95
SCAF11-209ENST00000547018 RS1O15537 224 aa9.1□□□□□ -0.95
SCAF11-209ENST00000547018 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
SCAF11-209ENST00000547018 SMAGPQ0VAQ4 97 aa9.09□□□□□ -0.95
SCAF11-209ENST00000547018 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
SCAF11-209ENST00000547018 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
SCAF11-209ENST00000547018 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
SCAF11-209ENST00000547018 HIGD1BQ9P298 99 aa9.09□□□□□ -0.95
SCAF11-209ENST00000547018 IGHV3-30-3P0DP02 117 aa9.08□□□□□ -0.96
SCAF11-209ENST00000547018 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
SCAF11-209ENST00000547018 COX6A2Q02221 97 aa9.08□□□□□ -0.96
SCAF11-209ENST00000547018 IGLL5B9A064 214 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 RPL32P62910 135 aaKnown RBP9.07□□□□□ -0.96
SCAF11-209ENST00000547018 UFSP1Q6NVU6 142 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 NTM-AS1Q6ZSK4 140 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 C1QTNF4Q9BXJ3 329 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 OXLD1Q5BKU9 147 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 NDUFA11Q86Y39 141 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 A8MTW9 85 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 PSMB2P49721 201 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 GTSF1LQ9H1H1 148 aa9.07□□□□□ -0.96
SCAF11-209ENST00000547018 HERV-K104P63124 156 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 NDUFA12Q9UI09 145 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 BEAN1Q3B7T3 259 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 CITED1Q99966 193 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
SCAF11-209ENST00000547018 A4D1N5 150 aa9.05□□□□□ -0.96
SCAF11-209ENST00000547018 K7EP34 96 aa9.05□□□□□ -0.96
SCAF11-209ENST00000547018 MUSTN1Q8IVN3 82 aa9.05□□□□□ -0.96
SCAF11-209ENST00000547018 C16orf74Q96GX8 76 aa9.05□□□□□ -0.96
SCAF11-209ENST00000547018 C10orf126Q8N4M7 172 aa9.05□□□□□ -0.96
SCAF11-209ENST00000547018 GYPEP15421 78 aa9.04□□□□□ -0.96
SCAF11-209ENST00000547018 SH2D6Q7Z4S9 175 aa9.04□□□□□ -0.96
SCAF11-209ENST00000547018 TRAV4A0A0B4J268 109 aa9.04□□□□□ -0.96
SCAF11-209ENST00000547018 WFDC2Q14508 124 aa9.04□□□□□ -0.96
SCAF11-209ENST00000547018 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
SCAF11-209ENST00000547018 PLAC8L1A1L4L8 177 aa9.04□□□□□ -0.96
SCAF11-209ENST00000547018 LEPROTO15243 131 aa9.03□□□□□ -0.96
SCAF11-209ENST00000547018 PRB2P02812 416 aaPredicted RBP9.03□□□□□ -0.96
SCAF11-209ENST00000547018 CKS1BP61024 79 aa9.03□□□□□ -0.96
SCAF11-209ENST00000547018 ETDBQ3ZM63 59 aa9.03□□□□□ -0.96
SCAF11-209ENST00000547018 FAM110AQ9BQ89 295 aa9.03□□□□□ -0.96
SCAF11-209ENST00000547018 TMEM243Q9BU79 118 aa9.03□□□□□ -0.96
SCAF11-209ENST00000547018 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.96
SCAF11-209ENST00000547018 C5orf38Q86SI9 138 aa9.02□□□□□ -0.96
SCAF11-209ENST00000547018 ADAMTSL4-AS1Q5T5F5 129 aa9.02□□□□□ -0.97
SCAF11-209ENST00000547018 NFE4Q86UQ8 179 aa9.02□□□□□ -0.97
SCAF11-209ENST00000547018 CSNK1G2-AS1Q8NCQ2 148 aa9.02□□□□□ -0.97
SCAF11-209ENST00000547018 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
SCAF11-209ENST00000547018 SS18L2Q9UHA2 77 aa9.02□□□□□ -0.97
SCAF11-209ENST00000547018 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
SCAF11-209ENST00000547018 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
SCAF11-209ENST00000547018 Q9H8V8 135 aa9.01□□□□□ -0.97
SCAF11-209ENST00000547018 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
SCAF11-209ENST00000547018 IGLV4-60A0A075B6I1 120 aa9.01□□□□□ -0.97
SCAF11-209ENST00000547018 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
SCAF11-209ENST00000547018 Q8N3U1 123 aa9.01□□□□□ -0.97
SCAF11-209ENST00000547018 F5H768 121 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
SCAF11-209ENST00000547018 UBE2D3P61077 147 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 UBE2D2P62837 147 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 AMELXQ99217 191 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 CFC1BP0CG36 223 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 CFC1P0CG37 223 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 PTH2Q96A98 100 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms