RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920		A8MZ25	164 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920		H7C2G1	150 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	IGKV3-20	P01619	116 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	CXCL5	P42830	114 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	LY6D	Q14210	128 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	ADAMTSL4-AS1	Q5T5F5	129 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	LINC00643	Q86TS7	51 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	DYNLRB2	Q8TF09	96 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920		Q96MF0	132 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	LINC01587	Q99440	93 aa		4.66	□□□□□ -1.66
SNHG1-225	ENST00000545920	IGHV3-64	A0A075B6Q5	118 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	TRAV8-3	A0A0A6YYJ7	113 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	TEX49	A0A1B0GTD5	131 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	RBMY1A1	P0DJD3	496 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	RBMY1C	P0DJD4	496 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	RBMY1F	Q15415	496 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	SDIM1	Q6ZPB5	146 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	LRRC75A-AS1	Q8N1F1	130 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	ZNF625	Q96I27	306 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	TMEM126A	Q9H061	195 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	MAP6D1	Q9H9H5	199 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	CDKN2A-AS1	Q9UH64	79 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	NBEA	Q8NFP9	2946 aa		4.65	□□□□□ -1.67
SNHG1-225	ENST00000545920	PRRC2C	Q9Y520	2896 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	KNCN	A6PVL3	124 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	SMIM1	B2RUZ4	78 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920		H0YGX0	51 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920		K7EQD1	137 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	EDN2	P20800	178 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	RPL28	P46779	137 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	DEFB114	Q30KQ6	69 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	LINC00242	Q5T6M2	205 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	LINC01561	Q8N1V8	128 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920		Q9H8V8	135 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	DSP	P15924	2871 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	ZNF292	O60281	2723 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	DMD	P11532	3685 aa		4.64	□□□□□ -1.67
SNHG1-225	ENST00000545920	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	IGHV3OR16-12	A0A075B7B8	117 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920		A0A1B0GX51	115 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	RBMY1B	A6NDE4	496 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	RBMY1E	A6NEQ0	496 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	TGFA	P01135	160 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	RBMY1D	P0C7P1	496 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	NHLRC4	P0CG21	123 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	MEIG1	Q5JSS6	88 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	HIST2H2BC	Q6DN03	193 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	HIST2H2BD	Q6DRA6	164 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	CITED2	Q99967	270 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	TMEM243	Q9BU79	118 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	CDC42SE2	Q9NRR3	84 aa		4.63	□□□□□ -1.67
SNHG1-225	ENST00000545920	CELSR3	Q9NYQ7	3312 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	TRBV6-4	A0A1B0GX49	114 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920		F5H768	121 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	PRIMA1	Q86XR5	153 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	STH	Q8IWL8	128 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	LINC00476	Q8WZB0	136 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	C16orf74	Q96GX8	76 aa		4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	BBC3	Q96PG8	261 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-225	ENST00000545920	IGHV3-73	A0A0B4J1V6	119 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	IBA57-AS1	B1ANH7	110 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	UBE2L6	O14933	153 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	CRLF1	O75462	422 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	CRP	P02741	224 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	SERTAD4-AS1	Q5TG53	156 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	MUC7	Q8TAX7	377 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	CLEC2B	Q92478	149 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	COL6A3	P12111	3177 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	MUC6	Q6W4X9	2439 aa		4.61	□□□□□ -1.67
SNHG1-225	ENST00000545920	BAALC-AS2	P0C853	105 aa		4.6	□□□□□ -1.67
SNHG1-225	ENST00000545920	IGHV4-31	P0DP07	118 aa		4.6	□□□□□ -1.67
SNHG1-225	ENST00000545920	HTN1	P15515	57 aa		4.6	□□□□□ -1.67
SNHG1-225	ENST00000545920	PROK1	P58294	105 aa		4.6	□□□□□ -1.67
SNHG1-225	ENST00000545920	C10orf99	Q6UWK7	81 aa		4.6	□□□□□ -1.67
SNHG1-225	ENST00000545920	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.6	□□□□□ -1.67
SNHG1-225	ENST00000545920	TRGV1	A0A0A0MS02	117 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920		H3BQ85	93 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	LOC400499	M0QZD8	3231 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	UQCRQ	O14949	82 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	DNAL4	O96015	105 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	COX6A2	Q02221	97 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	ODF3L2	Q3SX64	289 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	RNASE13	Q5GAN3	156 aa	Known RBP	4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	S100A7L2	Q5SY68	101 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	C5orf38	Q86SI9	138 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	C1orf158	Q8N1D5	194 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	COX7B2	Q8TF08	81 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	DEFB104A	Q8WTQ1	72 aa		4.59	□□□□□ -1.67
SNHG1-225	ENST00000545920	SPTBN2	O15020	2390 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	WDFY4	Q6ZS81	3184 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	ZZEF1	O43149	2961 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	PIEZO2	Q9H5I5	2752 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920		A0A087WZ39	114 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	USP17L23	D6RBM5	183 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	ATOX1	O00244	68 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	ATP5EP2	Q5VTU8	51 aa		4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.58	□□□□□ -1.68
SNHG1-225	ENST00000545920	OBSCN-AS1	Q96MR7	158 aa		4.58	□□□□□ -1.68

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