RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 IGKV2-29A2NJV5 120 aaPredicted RBP4.21□□□□□ -1.74
COPA-207ENST00000545284 XKRY2A2RUG3 117 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 M0QXV9 152 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 TSHBP01222 138 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 AKR1C3P42330 323 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 RPS20P60866 119 aaKnown RBP4.21□□□□□ -1.74
COPA-207ENST00000545284 MZT2BQ6NZ67 158 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 FP248Q71RG6 208 aaPredicted RBP4.21□□□□□ -1.74
COPA-207ENST00000545284 BAGE2Q86Y30 109 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
COPA-207ENST00000545284 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
COPA-207ENST00000545284 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
COPA-207ENST00000545284 SMAGPQ0VAQ4 97 aa4.2□□□□□ -1.74
COPA-207ENST00000545284 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
COPA-207ENST00000545284 FAM19A5Q7Z5A7 132 aaPredicted RBP4.2□□□□□ -1.74
COPA-207ENST00000545284 OPRPNQ99935 248 aaPredicted RBP4.2□□□□□ -1.74
COPA-207ENST00000545284 CSDC2Q9Y534 153 aaKnown RBP4.2□□□□□ -1.74
COPA-207ENST00000545284 SDHAF1A6NFY7 115 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 I3L3M4 83 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 NDUFA1O15239 70 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 ZNF726P1Q15940 193 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 MRAP2Q96G30 205 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 SMDT1Q9H4I9 107 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 CYTL1Q9NRR1 136 aa4.19□□□□□ -1.74
COPA-207ENST00000545284 DEFA3P59666 94 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 SPAG11BQ08648 103 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 CST9LP1Q5W188 147 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 C9orf62Q8N4C0 152 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 TPPP3Q9BW30 176 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 ALG5Q9Y673 324 aa4.18□□□□□ -1.74
COPA-207ENST00000545284 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 A0A1B0GVG6 124 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 INMT-MINDY4F8WBC2 141 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 TNFRSF6BO95407 300 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 PMCHP20382 165 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
COPA-207ENST00000545284 LBHQ53QV2 105 aaPredicted RBP4.17□□□□□ -1.74
COPA-207ENST00000545284 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 SPAG11AQ6PDA7 123 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 CNFNQ9BYD5 112 aa4.17□□□□□ -1.74
COPA-207ENST00000545284 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 MAP1LC3B2A6NCE7 125 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 NDUFC2-KCTD14E9PQ53 114 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 GAGE2EQ4V326 116 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 KRTAP13-2Q52LG2 175 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 AKR1C8PQ5T2L2 129 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 LYZL1Q6UWQ5 148 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 TMUB2Q71RG4 321 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 SMIM15Q7Z3B0 74 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 SMIM12Q96EX1 92 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 MAP1LC3BQ9GZQ8 125 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 CTDSP1Q9GZU7 261 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
COPA-207ENST00000545284 IGKV2D-26A0A0A0MRZ7 120 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 BORCS7-ASMTA0A0B4J1R7 106 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 C7orf77A4D0Y5 90 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 BCE1O60756 84 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 IFNA1P01562 189 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 CTRLP40313 264 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 MT1HP80294 61 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 ENKURQ8TC29 256 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 C6orf48Q9UBA6 75 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 TP73-AS1Q9UF72 201 aa4.15□□□□□ -1.75
COPA-207ENST00000545284 TMA7Q9Y2S6 64 aaKnown RBP4.15□□□□□ -1.75
COPA-207ENST00000545284 TRBV27A0A0K0K1C4 114 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 SSNA1O43805 119 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 PAGE4O60829 102 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 PFDN1O60925 122 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
COPA-207ENST00000545284 TWIST1Q15672 202 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 ORAOV1Q8WV07 137 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 RPL39LQ96EH5 51 aaKnown RBP4.14□□□□□ -1.75
COPA-207ENST00000545284 PACRGQ96M98 296 aaPredicted RBP4.14□□□□□ -1.75
COPA-207ENST00000545284 MARVELD1Q9BSK0 173 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 BIN3Q9NQY0 253 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 C22orf24Q9Y442 160 aa4.14□□□□□ -1.75
COPA-207ENST00000545284 TRAV13-1A0A0B4J241 112 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 SCO2A0A1W2PP80 73 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
COPA-207ENST00000545284 C9orf129Q5T035 196 aaKnown RBP4.13□□□□□ -1.75
COPA-207ENST00000545284 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 UNQ6190/PRO20217Q6UXQ8 127 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 LINC00299Q6ZSB3 139 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 TIMM21Q9BVV7 248 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 ST20Q9HBF5 79 aa4.13□□□□□ -1.75
COPA-207ENST00000545284 RAB19A4D1S5 217 aa4.12□□□□□ -1.75
COPA-207ENST00000545284 RPL35P42766 123 aaKnown RBP4.12□□□□□ -1.75
COPA-207ENST00000545284 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
COPA-207ENST00000545284 RPL7L1Q6DKI1 246 aaKnown RBP4.12□□□□□ -1.75
COPA-207ENST00000545284 TMEM18Q96B42 140 aa4.12□□□□□ -1.75
COPA-207ENST00000545284 UBE2D4Q9Y2X8 147 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms