RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 WNK3Q9BYP7 1800 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 KIAA1109Q2LD37 5005 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 TRBV6-1A0A0K0K1D8 114 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 SPRR1BP22528 89 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 S100A3P33764 101 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 COPZ1P61923 177 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 MAFIPQ8WZ33 124 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 SEC11CQ9BY50 192 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 TPT1P8Q9HAU6 139 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 FASNP49327 2511 aaKnown RBP-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 PCNX1Q96RV3 2341 aa-0.64□□□□□ -2.51
RAP1B-231ENST00000544639 IQSEC2Q5JU85 1478 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 IFT140Q96RY7 1462 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 TNFP01375 233 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 COX6B1P14854 86 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 PIGYQ3MUY2 71 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 AGPAT4-IT1Q9H0P7 198 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 URB1O60287 2271 aaKnown RBP-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 PI4KAP42356 2102 aa-0.65□□□□□ -2.51
RAP1B-231ENST00000544639 MYH8P13535 1937 aa-0.66□□□□□ -2.51
RAP1B-231ENST00000544639 ERCC6L2Q5T890 1561 aa-0.66□□□□□ -2.51
RAP1B-231ENST00000544639 ZNF518AQ6AHZ1 1483 aa-0.66□□□□□ -2.51
RAP1B-231ENST00000544639 WDR7Q9Y4E6 1490 aa-0.66□□□□□ -2.51
RAP1B-231ENST00000544639 I3L2K1 104 aa-0.66□□□□□ -2.52
RAP1B-231ENST00000544639 SPINK4O60575 86 aa-0.66□□□□□ -2.52
RAP1B-231ENST00000544639 SIX6O95475 246 aa-0.66□□□□□ -2.52
RAP1B-231ENST00000544639 TCEAL4Q96EI5 215 aa-0.66□□□□□ -2.52
RAP1B-231ENST00000544639 TMEM191AQ9H0A3 160 aa-0.66□□□□□ -2.52
RAP1B-231ENST00000544639 NWD2Q9ULI1 1742 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 PXDNQ92626 1479 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 DNAH6Q9C0G6 4158 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 LRP6O75581 1613 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 TACC2O95359 2948 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 KDM3BQ7LBC6 1761 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 M0R135 149 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 PPP1R17O96001 155 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 DPH3Q96FX2 82 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 R4GMQ9 66 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 BICRAQ9NZM4 1560 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 BIRC6Q9NR09 4857 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 MYO18BQ8IUG5 2567 aa-0.67□□□□□ -2.52
RAP1B-231ENST00000544639 HCG22E2RYF7 251 aa-0.68□□□□□ -2.52
RAP1B-231ENST00000544639 SMCO1Q147U7 214 aa-0.68□□□□□ -2.52
RAP1B-231ENST00000544639 SPTBN4Q9H254 2564 aa-0.68□□□□□ -2.52
RAP1B-231ENST00000544639 NBPF19A0A087WUL8 3843 aa-0.68□□□□□ -2.52
RAP1B-231ENST00000544639 MUC17Q685J3 4493 aa-0.68□□□□□ -2.52
RAP1B-231ENST00000544639 LAMA2P24043 3122 aaKnown RBP-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 PRDM2Q13029 1718 aa-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 LOC105371267A0A1B0GV96 52 aa-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 DEFB135Q30KP9 77 aa-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 DEFB105AQ8NG35 78 aa-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 MRC1P22897 1456 aa-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 FAT3Q8TDW7 4589 aa-0.69□□□□□ -2.52
RAP1B-231ENST00000544639 SPEF2Q9C093 1822 aa-0.7□□□□□ -2.52
RAP1B-231ENST00000544639 SPAARA0A1B0GVQ0 90 aa-0.7□□□□□ -2.52
RAP1B-231ENST00000544639 SPRR2FQ96RM1 72 aa-0.7□□□□□ -2.52
RAP1B-231ENST00000544639 LINC00472Q9H8W2 130 aa-0.7□□□□□ -2.52
RAP1B-231ENST00000544639 CCDC167Q9P0B6 97 aa-0.7□□□□□ -2.52
RAP1B-231ENST00000544639 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.7□□□□□ -2.52
RAP1B-231ENST00000544639 PAPPAQ13219 1627 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 PKHD1L1Q86WI1 4243 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 MYO7BQ6PIF6 2116 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 HTTP42858 3142 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 TRAV13-2A0A0B4J235 113 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 CTXND1A0A1B0GTU2 59 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 DEFB112Q30KQ8 113 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 C10orf128Q5T292 105 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 Q6JHZ5 121 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 SMIM4Q8WVI0 70 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 TSC2P49815 1807 aa-0.71□□□□□ -2.52
RAP1B-231ENST00000544639 DNAJC13O75165 2243 aa-0.72□□□□□ -2.52
RAP1B-231ENST00000544639 TMEM170BQ5T4T1 132 aa-0.72□□□□□ -2.52
RAP1B-231ENST00000544639 AMELXQ99217 191 aa-0.72□□□□□ -2.52
RAP1B-231ENST00000544639 PKD1P98161 4303 aa-0.72□□□□□ -2.53
RAP1B-231ENST00000544639 SONP18583 2426 aaKnown RBP-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 ZNF236Q9UL36 1845 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 DNAH3Q8TD57 4116 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 SYS1-DBNDD2H3BUS1 97 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 HIST1H1DP16402 221 aaKnown RBP-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 DEFB123Q8N688 67 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 AQP10Q96PS8 301 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 SPG11Q96JI7 2443 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 MYOM3Q5VTT5 1437 aa-0.73□□□□□ -2.53
RAP1B-231ENST00000544639 LAMA1P25391 3075 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 TEP1Q99973 2627 aaKnown RBP-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 MT1AP04731 61 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 COX17Q14061 63 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 TTC9CQ8N5M4 171 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 PFDN5Q99471 154 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 APLNQ9ULZ1 77 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 LENEPQ9Y5L5 61 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 V9GYH0 126 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 NSD3Q9BZ95 1437 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 GAPVD1Q14C86 1478 aa-0.74□□□□□ -2.53
RAP1B-231ENST00000544639 DNAH9Q9NYC9 4486 aa-0.75□□□□□ -2.53
RAP1B-231ENST00000544639 DOCK1Q14185 1865 aa-0.75□□□□□ -2.53
RAP1B-231ENST00000544639 VPS13DQ5THJ4 4388 aa-0.75□□□□□ -2.53
RAP1B-231ENST00000544639 AKAP13Q12802 2813 aa-0.75□□□□□ -2.53
RAP1B-231ENST00000544639 Q8N8P6 123 aa-0.75□□□□□ -2.53
RAP1B-231ENST00000544639 LSM10Q969L4 123 aaKnown RBP-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms