RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
SPDEF-202ENST00000544425 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
SPDEF-202ENST00000544425 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
SPDEF-202ENST00000544425 IGHV4-28A0A0C4DH34 117 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 LOC100131303A0A0U1RQF7 123 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 H7C423 109 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 K7EP13 123 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 Q8NAQ8 132 aa11.31□□□□□ -0.6
SPDEF-202ENST00000544425 DGAT2L7PQ6IED9 249 aa11.3□□□□□ -0.6
SPDEF-202ENST00000544425 NOTCH3Q9UM47 2321 aa11.3□□□□□ -0.6
SPDEF-202ENST00000544425 FBN1P35555 2871 aaKnown RBP11.3□□□□□ -0.6
SPDEF-202ENST00000544425 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
SPDEF-202ENST00000544425 ZNF22P17026 224 aaPredicted RBP11.29□□□□□ -0.6
SPDEF-202ENST00000544425 SEC11AP67812 179 aa11.29□□□□□ -0.6
SPDEF-202ENST00000544425 Q6ZUT4 128 aa11.29□□□□□ -0.6
SPDEF-202ENST00000544425 PRO0255Q9UI72 69 aa11.29□□□□□ -0.6
SPDEF-202ENST00000544425 TINCRA0A1B0GVN0 87 aa11.29□□□□□ -0.6
SPDEF-202ENST00000544425 TMEM243Q9BU79 118 aa11.29□□□□□ -0.6
SPDEF-202ENST00000544425 TAL2Q16559 108 aa11.27□□□□□ -0.6
SPDEF-202ENST00000544425 UBE2D1P51668 147 aa11.27□□□□□ -0.61
SPDEF-202ENST00000544425 TRBV6-8A0A0A6YYG3 113 aa11.26□□□□□ -0.61
SPDEF-202ENST00000544425 LEPROTO15243 131 aa11.26□□□□□ -0.61
SPDEF-202ENST00000544425 TIRAPP58753 221 aa11.26□□□□□ -0.61
SPDEF-202ENST00000544425 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
SPDEF-202ENST00000544425 FAM19A3Q7Z5A8 133 aa11.26□□□□□ -0.61
SPDEF-202ENST00000544425 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 UBE2L6O14933 153 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 RBX1P62877 108 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 CDC42SE2Q9NRR3 84 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 DEFB4AO15263 64 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 GYPEP15421 78 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 DAD1P61803 113 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
SPDEF-202ENST00000544425 J3QQQ9 107 aa11.24□□□□□ -0.61
SPDEF-202ENST00000544425 OR5A1Q8NGJ0 315 aa11.24□□□□□ -0.61
SPDEF-202ENST00000544425 A6NDN8 102 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 VAMP3Q15836 100 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 AMMECR1LQ6DCA0 310 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 ATP6V0E2Q8NHE4 81 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 TMEM101Q96IK0 257 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 PAX4O43316 350 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 ATP5G1P05496 136 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 CEND1Q8N111 149 aa11.23□□□□□ -0.61
SPDEF-202ENST00000544425 TSPEAR-AS2P59090 65 aa11.22□□□□□ -0.61
SPDEF-202ENST00000544425 GEMIN7Q9H840 131 aaKnown RBP11.22□□□□□ -0.61
SPDEF-202ENST00000544425 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
SPDEF-202ENST00000544425 H3BRM9 83 aa11.21□□□□□ -0.61
SPDEF-202ENST00000544425 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
SPDEF-202ENST00000544425 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
SPDEF-202ENST00000544425 G3V4G9 280 aa11.21□□□□□ -0.62
SPDEF-202ENST00000544425 HERVK_113P63121 156 aa11.21□□□□□ -0.62
SPDEF-202ENST00000544425 SCGB1D4Q6XE38 83 aa11.21□□□□□ -0.62
SPDEF-202ENST00000544425 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.62
SPDEF-202ENST00000544425 GCSHP23434 173 aa11.2□□□□□ -0.62
SPDEF-202ENST00000544425 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
SPDEF-202ENST00000544425 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
SPDEF-202ENST00000544425 C9orf118A6NHY6 69 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 A0A0J9YY99 117 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 FXYD2P54710 66 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 GAGE6Q13070 117 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
SPDEF-202ENST00000544425 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
SPDEF-202ENST00000544425 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
SPDEF-202ENST00000544425 COX6A2Q02221 97 aa11.17□□□□□ -0.62
SPDEF-202ENST00000544425 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
SPDEF-202ENST00000544425 CMYA5Q8N3K9 4069 aa11.17□□□□□ -0.62
SPDEF-202ENST00000544425 IGHV3-64A0A075B6Q5 118 aa11.17□□□□□ -0.62
SPDEF-202ENST00000544425 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
SPDEF-202ENST00000544425 TRAV13-1A0A0B4J241 112 aa11.16□□□□□ -0.62
SPDEF-202ENST00000544425 A0A1B0GUV1 79 aa11.16□□□□□ -0.62
SPDEF-202ENST00000544425 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
SPDEF-202ENST00000544425 F5H768 121 aa11.15□□□□□ -0.62
SPDEF-202ENST00000544425 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.63
SPDEF-202ENST00000544425 SPINK8P0C7L1 97 aa11.15□□□□□ -0.63
SPDEF-202ENST00000544425 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.63
SPDEF-202ENST00000544425 SH2D6Q7Z4S9 175 aa11.15□□□□□ -0.63
SPDEF-202ENST00000544425 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.63
SPDEF-202ENST00000544425 NBEAL2Q6ZNJ1 2754 aa11.14□□□□□ -0.63
SPDEF-202ENST00000544425 MRPL23Q16540 153 aaKnown RBP11.14□□□□□ -0.63
SPDEF-202ENST00000544425 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
SPDEF-202ENST00000544425 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
SPDEF-202ENST00000544425 H3BUT2 72 aa11.13□□□□□ -0.63
SPDEF-202ENST00000544425 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
SPDEF-202ENST00000544425 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
SPDEF-202ENST00000544425 C10orf126Q8N4M7 172 aa11.12□□□□□ -0.63
SPDEF-202ENST00000544425 RETNQ9HD89 108 aa11.12□□□□□ -0.63
SPDEF-202ENST00000544425 K7EP34 96 aa11.12□□□□□ -0.63
SPDEF-202ENST00000544425 NDUFA12Q9UI09 145 aa11.12□□□□□ -0.63
SPDEF-202ENST00000544425 A0A096LPF7 62 aa11.11□□□□□ -0.63
SPDEF-202ENST00000544425 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
SPDEF-202ENST00000544425 A0A1B0GWB2 263 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms