RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 RNASEKQ6P5S7 137 aaKnown RBP5.65□□□□□ -1.5
C2CD3-220ENST00000544293 C9orf62Q8N4C0 152 aa5.65□□□□□ -1.5
C2CD3-220ENST00000544293 IGLV1-50A0A075B6I6 118 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 A0A0U1RQV1 116 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 A0A1B0GV50 99 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 NCR2O95944 276 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 CAMPP49913 170 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 CCL20P78556 96 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 AMMECR1LQ6DCA0 310 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 SFT2D1Q8WV19 159 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 DIRC1Q969H9 104 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 CNFNQ9BYD5 112 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 CDC42SE2Q9NRR3 84 aa5.64□□□□□ -1.51
C2CD3-220ENST00000544293 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
C2CD3-220ENST00000544293 RAB19A4D1S5 217 aa5.63□□□□□ -1.51
C2CD3-220ENST00000544293 F2Z2F3 143 aa5.63□□□□□ -1.51
C2CD3-220ENST00000544293 APOMO95445 188 aa5.63□□□□□ -1.51
C2CD3-220ENST00000544293 GIPP09681 153 aaPredicted RBP5.63□□□□□ -1.51
C2CD3-220ENST00000544293 C11orf52Q96A22 123 aa5.63□□□□□ -1.51
C2CD3-220ENST00000544293 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
C2CD3-220ENST00000544293 TRBV20OR9-2A0A075B6H5 130 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 FXYD6-FXYD2A0A087WZ82 144 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 SDHAF1A6NFY7 115 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 ZNF25P17030 456 aaPredicted RBP5.62□□□□□ -1.51
C2CD3-220ENST00000544293 CTRLP40313 264 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 LINC00310P59036 64 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 RPS20P60866 119 aaKnown RBP5.62□□□□□ -1.51
C2CD3-220ENST00000544293 CENPWQ5EE01 88 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
C2CD3-220ENST00000544293 TSHBP01222 138 aa5.61□□□□□ -1.51
C2CD3-220ENST00000544293 APCSP02743 223 aa5.61□□□□□ -1.51
C2CD3-220ENST00000544293 KCNRGQ8N5I3 272 aa5.61□□□□□ -1.51
C2CD3-220ENST00000544293 NUDT10Q8NFP7 164 aa5.61□□□□□ -1.51
C2CD3-220ENST00000544293 NUDT11Q96G61 164 aa5.61□□□□□ -1.51
C2CD3-220ENST00000544293 A0A087WZ39 114 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 TRBV6-5A0A0K0K1A5 114 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 BCL2L11O43521 198 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 IFNA1P01562 189 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 TWIST1Q15672 202 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
C2CD3-220ENST00000544293 FAM213BQ8TBF2 198 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 CAMK2N2Q96S95 79 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
C2CD3-220ENST00000544293 RNASE7Q9H1E1 156 aaKnown RBP5.6□□□□□ -1.51
C2CD3-220ENST00000544293 I3L3M4 83 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 PFDN1O60925 122 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
C2CD3-220ENST00000544293 SS18Q15532 418 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 FAM104AQ969W3 186 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 ISOC2Q96AB3 205 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
C2CD3-220ENST00000544293 SMLR1H3BR10 107 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 ARPC5O15511 151 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 TSPAN13O95857 204 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 RPL18AQ02543 176 aaKnown RBP5.58□□□□□ -1.52
C2CD3-220ENST00000544293 RNF151Q2KHN1 245 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 C5orf38Q86SI9 138 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 RPP21Q9H633 154 aaKnown RBP5.58□□□□□ -1.52
C2CD3-220ENST00000544293 TMEM242Q9NWH2 141 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
C2CD3-220ENST00000544293 PMCHP20382 165 aa5.57□□□□□ -1.52
C2CD3-220ENST00000544293 EIF5AP63241 154 aaKnown RBP5.57□□□□□ -1.52
C2CD3-220ENST00000544293 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
C2CD3-220ENST00000544293 EIF5AL1Q6IS14 154 aaKnown RBP5.57□□□□□ -1.52
C2CD3-220ENST00000544293 TMEM101Q96IK0 257 aa5.57□□□□□ -1.52
C2CD3-220ENST00000544293 BTF3L4Q96K17 158 aa5.57□□□□□ -1.52
C2CD3-220ENST00000544293 CARHSP1Q9Y2V2 147 aaKnown RBP5.57□□□□□ -1.52
C2CD3-220ENST00000544293 XKRY2A2RUG3 117 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 UMAD1C9J7I0 102 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 K7EN84 100 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 COX7A2LO14548 114 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 SMIM12Q96EX1 92 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
C2CD3-220ENST00000544293 GNG13Q9P2W3 67 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
C2CD3-220ENST00000544293 A0A087X002 238 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 TRAV1-1A0A0B4J248 108 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 C1orf196B1AJZ1 125 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 MALP21145 153 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
C2CD3-220ENST00000544293 GNG4P50150 75 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 UNQ6190/PRO20217Q6UXQ8 127 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 OCC1Q8TAD7 63 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 C6orf48Q9UBA6 75 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
C2CD3-220ENST00000544293 CSDC2Q9Y534 153 aaKnown RBP5.55□□□□□ -1.52
C2CD3-220ENST00000544293 TRAV13-1A0A0B4J241 112 aa5.54□□□□□ -1.52
C2CD3-220ENST00000544293 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
C2CD3-220ENST00000544293 UBE2D1P51668 147 aa5.54□□□□□ -1.52
C2CD3-220ENST00000544293 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
C2CD3-220ENST00000544293 TEX261Q6UWH6 196 aa5.54□□□□□ -1.52
C2CD3-220ENST00000544293 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
C2CD3-220ENST00000544293 MRAP2Q96G30 205 aa5.54□□□□□ -1.52
C2CD3-220ENST00000544293 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
C2CD3-220ENST00000544293 ZNF861PO60384 105 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms