RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 HELZ2Q9BYK8 2649 aaKnown RBP11.57□□□□□ -0.56
SCNN1A-221ENST00000543768 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 LOC107984156A0A0G2JMH3 177 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 IGLV1-51P01701 117 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 ARL17AQ8IVW1 177 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 C19orf73Q9NVV2 129 aa11.56□□□□□ -0.56
SCNN1A-221ENST00000543768 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
SCNN1A-221ENST00000543768 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
SCNN1A-221ENST00000543768 Q6ZTI0 123 aa11.55□□□□□ -0.56
SCNN1A-221ENST00000543768 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
SCNN1A-221ENST00000543768 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
SCNN1A-221ENST00000543768 SMR3AQ99954 134 aa11.54□□□□□ -0.56
SCNN1A-221ENST00000543768 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
SCNN1A-221ENST00000543768 ANAPC13Q9BS18 74 aa11.54□□□□□ -0.56
SCNN1A-221ENST00000543768 NDUFA7O95182 113 aa11.53□□□□□ -0.56
SCNN1A-221ENST00000543768 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
SCNN1A-221ENST00000543768 SBSPONQ8IVN8 264 aa11.53□□□□□ -0.56
SCNN1A-221ENST00000543768 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
SCNN1A-221ENST00000543768 IGHV3-30-3P0DP02 117 aa11.53□□□□□ -0.56
SCNN1A-221ENST00000543768 NDUFA11Q86Y39 141 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 TRAV8-3A0A0A6YYJ7 113 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 CFC1BP0CG36 223 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 CFC1P0CG37 223 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 ZFAND6Q6FIF0 208 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 TIMM21Q9BVV7 248 aa11.52□□□□□ -0.57
SCNN1A-221ENST00000543768 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 PLAC8L1A1L4L8 177 aa11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 TCL1BO95988 128 aa11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 SS18L2Q9UHA2 77 aa11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
SCNN1A-221ENST00000543768 TMEM262E9PQX1 116 aa11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 RPL35AP18077 110 aaKnown RBP11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 GAGE5Q13069 117 aa11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 GAGE6Q13070 117 aa11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 K7EQD1 137 aa11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
SCNN1A-221ENST00000543768 TRBV10-1A0A0K0K1A3 114 aa11.49□□□□□ -0.57
SCNN1A-221ENST00000543768 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
SCNN1A-221ENST00000543768 KRTAP10-3P60369 221 aa11.49□□□□□ -0.57
SCNN1A-221ENST00000543768 ANKRD29Q8N6D5 301 aa11.49□□□□□ -0.57
SCNN1A-221ENST00000543768 NOTCH3Q9UM47 2321 aa11.49□□□□□ -0.57
SCNN1A-221ENST00000543768 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
SCNN1A-221ENST00000543768 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
SCNN1A-221ENST00000543768 NTM-AS1Q6ZSK4 140 aa11.48□□□□□ -0.57
SCNN1A-221ENST00000543768 C16orf74Q96GX8 76 aa11.48□□□□□ -0.57
SCNN1A-221ENST00000543768 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
SCNN1A-221ENST00000543768 CITED1Q99966 193 aa11.47□□□□□ -0.57
SCNN1A-221ENST00000543768 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
SCNN1A-221ENST00000543768 A4D1N5 150 aa11.47□□□□□ -0.57
SCNN1A-221ENST00000543768 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
SCNN1A-221ENST00000543768 A8MZ25 164 aa11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 EIF4EBP3O60516 100 aaPredicted RBP11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 DAZ4Q86SG3 579 aaKnown RBP11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 MUSTN1Q8IVN3 82 aa11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 LITAFQ99732 161 aa11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 DAZ3Q9NR90 486 aaKnown RBP11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 HIVEP2P31629 2446 aa11.46□□□□□ -0.57
SCNN1A-221ENST00000543768 TIRAPP58753 221 aa11.46□□□□□ -0.58
SCNN1A-221ENST00000543768 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.58
SCNN1A-221ENST00000543768 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.46□□□□□ -0.58
SCNN1A-221ENST00000543768 CDKN2A-AS1Q9UH64 79 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 IGLV5-45A0A087WSX0 123 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE7O76087 117 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE4Q13068 117 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 OVOL2Q9BRP0 275 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 PRO1854Q9UHT4 67 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
SCNN1A-221ENST00000543768 B5MCH6 92 aa11.44□□□□□ -0.58
SCNN1A-221ENST00000543768 LY6G6DO95868 133 aa11.44□□□□□ -0.58
SCNN1A-221ENST00000543768 NHLRC4P0CG21 123 aaPredicted RBP11.44□□□□□ -0.58
SCNN1A-221ENST00000543768 COX6A2Q02221 97 aa11.44□□□□□ -0.58
SCNN1A-221ENST00000543768 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
SCNN1A-221ENST00000543768 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
SCNN1A-221ENST00000543768 M0QXV9 152 aa11.43□□□□□ -0.58
SCNN1A-221ENST00000543768 TRGV2A0A075B6R0 118 aa11.42□□□□□ -0.58
SCNN1A-221ENST00000543768 SLC25A20O43772 301 aa11.42□□□□□ -0.58
SCNN1A-221ENST00000543768 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
SCNN1A-221ENST00000543768 LINC00242Q5T6M2 205 aa11.41□□□□□ -0.58
SCNN1A-221ENST00000543768 FAM19A3Q7Z5A8 133 aa11.41□□□□□ -0.58
SCNN1A-221ENST00000543768 LINC00482Q8N8I6 264 aa11.41□□□□□ -0.58
SCNN1A-221ENST00000543768 A0A0B4J2C4 111 aa11.41□□□□□ -0.58
SCNN1A-221ENST00000543768 IGHV3-33P01772 117 aa11.41□□□□□ -0.58
SCNN1A-221ENST00000543768 TMEM101Q96IK0 257 aa11.41□□□□□ -0.58
SCNN1A-221ENST00000543768 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 PF4P02776 101 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 GAGE2EQ4V326 116 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.58
SCNN1A-221ENST00000543768 SPANXCQ9NY87 97 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms