RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 TRAV8-4A0A0B4J246 113 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 COLCA2A8K830 154 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 TNP2Q05952 138 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 SS18Q15532 418 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 RNASE13Q5GAN3 156 aaKnown RBP4.23□□□□□ -1.73
LTBR-212ENST00000543542 C2orf66Q6UXQ4 117 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 Q6ZN92 141 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
LTBR-212ENST00000543542 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 C18orf32Q8TCD1 76 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 SPANXA1Q9NS26 97 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 UBE2D4Q9Y2X8 147 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
LTBR-212ENST00000543542 TRAV13-1A0A0B4J241 112 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 LECT2O14960 151 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 LINC00614P0C842 121 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 Q6ZRN7 208 aaPredicted RBP4.22□□□□□ -1.73
LTBR-212ENST00000543542 Q6ZUT4 128 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 SCGB3A1Q96QR1 104 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 C2orf88Q9BSF0 95 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 TIMM21Q9BVV7 248 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 CDC42SE2Q9NRR3 84 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 AP5S1Q9NUS5 200 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 PRR34Q9NV39 138 aa4.22□□□□□ -1.73
LTBR-212ENST00000543542 CSDC2Q9Y534 153 aaKnown RBP4.22□□□□□ -1.73
LTBR-212ENST00000543542 LINC00959A0A1B0GUT2 108 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 LINC01549A6NIU2 74 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 IFITM10A6NMD0 228 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 C1orf196B1AJZ1 125 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 CCL25O15444 150 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 XCL1P47992 114 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 PAPPA-AS1Q5QFB9 102 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 TEX43Q6ZNM6 134 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 CHCHD10Q8WYQ3 142 aaPredicted RBP4.21□□□□□ -1.74
LTBR-212ENST00000543542 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 OPRPNQ99935 248 aaPredicted RBP4.21□□□□□ -1.74
LTBR-212ENST00000543542 VCX2Q9H322 139 aa4.21□□□□□ -1.74
LTBR-212ENST00000543542 DNAH17Q9UFH2 4485 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 IGLV4-3A0A075B6K6 122 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 A0A087WTM6 91 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 HSBP1O75506 76 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 HBDP02042 147 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 MALP21145 153 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 NDUFA6P56556 154 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 MRPS36P82909 103 aaKnown RBP4.2□□□□□ -1.74
LTBR-212ENST00000543542 PMCHL1Q16048 86 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 C14orf177Q52M58 125 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 SPATA12Q7Z6I5 190 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 TOMM6Q96B49 74 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 CHCHD1Q96BP2 118 aaKnown RBP4.2□□□□□ -1.74
LTBR-212ENST00000543542 PYGO1Q9Y3Y4 419 aa4.2□□□□□ -1.74
LTBR-212ENST00000543542 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.19□□□□□ -1.74
LTBR-212ENST00000543542 USP17L23D6RBM5 183 aa4.19□□□□□ -1.74
LTBR-212ENST00000543542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.19□□□□□ -1.74
LTBR-212ENST00000543542 CFAP161Q6P656 301 aa4.19□□□□□ -1.74
LTBR-212ENST00000543542 ERASQ7Z444 233 aa4.19□□□□□ -1.74
LTBR-212ENST00000543542 TIMM17AQ99595 171 aa4.19□□□□□ -1.74
LTBR-212ENST00000543542 IGLV5-52A0A0A0MRZ9 124 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 LRCOL1A6NCL2 159 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 LINC01546A6NGU7 62 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 IGIPA6NJ69 53 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 C16orf90A8MZG2 172 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 COX7A2LO14548 114 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 NPSP0C0P6 89 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 ZC2HC1BQ5TFG8 222 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 Q8N814 137 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 URB1-AS1Q96HZ7 61 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 PGPEP1Q9NXJ5 209 aa4.18□□□□□ -1.74
LTBR-212ENST00000543542 A0A1B0GVY2 172 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 SERF1AO75920 110 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 ATP5LO75964 103 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 APOMO95445 188 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 PRSS1P07477 247 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 FUSP35637 526 aaKnown RBP eCLIP4.17□□□□□ -1.74
LTBR-212ENST00000543542 SEC11AP67812 179 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 FOXI1Q12951 378 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 WFDC2Q14508 124 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 HIGD2BQ4VC39 106 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 C5orf38Q86SI9 138 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 FAM19A2Q8N3H0 131 aa4.17□□□□□ -1.74
LTBR-212ENST00000543542 GEMIN7Q9H840 131 aaKnown RBP4.17□□□□□ -1.74
LTBR-212ENST00000543542 PKD1P98161 4303 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 IGHV1-58A0A0C4DH39 117 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 H0Y8G0 127 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 ZNF561-AS1K7EIQ3 104 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BKO60814 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 LEPROTL1O95214 131 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BJP06899 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 FABP4P15090 132 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BOP23527 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BBP33778 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 UBE2D1P51668 147 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms