RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 LINC01587Q99440 93 aa12.03□□□□□ -0.48
KDM2B-216ENST00000543025 IGHV3-53P01767 116 aa12.03□□□□□ -0.48
KDM2B-216ENST00000543025 PRSS2P07478 247 aa12.03□□□□□ -0.48
KDM2B-216ENST00000543025 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
KDM2B-216ENST00000543025 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
KDM2B-216ENST00000543025 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
KDM2B-216ENST00000543025 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.48
KDM2B-216ENST00000543025 MT-ATP8P03928 68 aa12.02□□□□□ -0.48
KDM2B-216ENST00000543025 XGP55808 180 aa12.02□□□□□ -0.48
KDM2B-216ENST00000543025 Q8N2B8 174 aa12.02□□□□□ -0.48
KDM2B-216ENST00000543025 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.49
KDM2B-216ENST00000543025 C4orf3Q8WVX3 66 aa12.02□□□□□ -0.49
KDM2B-216ENST00000543025 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 INSP01308 110 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 CKS1BP61024 79 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 MIAQ16674 131 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
KDM2B-216ENST00000543025 HIVEP1P15822 2718 aa12.01□□□□□ -0.49
KDM2B-216ENST00000543025 IGHV3-38A0A0C4DH36 116 aa12□□□□□ -0.49
KDM2B-216ENST00000543025 TRIAP1O43715 76 aa12□□□□□ -0.49
KDM2B-216ENST00000543025 BEAN1Q3B7T3 259 aa12□□□□□ -0.49
KDM2B-216ENST00000543025 SONP18583 2426 aaKnown RBP12□□□□□ -0.49
KDM2B-216ENST00000543025 LINC01620Q4KN68 170 aa12□□□□□ -0.49
KDM2B-216ENST00000543025 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
KDM2B-216ENST00000543025 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
KDM2B-216ENST00000543025 A8MZ25 164 aa11.99□□□□□ -0.49
KDM2B-216ENST00000543025 KHDC1LQ5JSQ8 128 aa11.99□□□□□ -0.49
KDM2B-216ENST00000543025 RS1O15537 224 aa11.99□□□□□ -0.49
KDM2B-216ENST00000543025 DEFB114Q30KQ6 69 aa11.98□□□□□ -0.49
KDM2B-216ENST00000543025 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
KDM2B-216ENST00000543025 LINC01600Q96MT4 127 aa11.97□□□□□ -0.49
KDM2B-216ENST00000543025 TIMM17BO60830 172 aa11.97□□□□□ -0.49
KDM2B-216ENST00000543025 RNF183Q96D59 192 aa11.97□□□□□ -0.49
KDM2B-216ENST00000543025 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
KDM2B-216ENST00000543025 TIRAPP58753 221 aa11.96□□□□□ -0.49
KDM2B-216ENST00000543025 NPC2P61916 151 aa11.96□□□□□ -0.49
KDM2B-216ENST00000543025 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.49
KDM2B-216ENST00000543025 CDKN2A-AS1Q9UH64 79 aa11.96□□□□□ -0.49
KDM2B-216ENST00000543025 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.5
KDM2B-216ENST00000543025 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.5
KDM2B-216ENST00000543025 COX6CP09669 75 aa11.95□□□□□ -0.5
KDM2B-216ENST00000543025 IFITM1P13164 125 aa11.95□□□□□ -0.5
KDM2B-216ENST00000543025 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
KDM2B-216ENST00000543025 NDUFA1O15239 70 aa11.94□□□□□ -0.5
KDM2B-216ENST00000543025 XCL2Q9UBD3 114 aa11.94□□□□□ -0.5
KDM2B-216ENST00000543025 HIVEP2P31629 2446 aa11.94□□□□□ -0.5
KDM2B-216ENST00000543025 RPL13AP40429 203 aaKnown RBP11.93□□□□□ -0.5
KDM2B-216ENST00000543025 TMEM101Q96IK0 257 aa11.93□□□□□ -0.5
KDM2B-216ENST00000543025 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
KDM2B-216ENST00000543025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.92□□□□□ -0.5
KDM2B-216ENST00000543025 CUBNO60494 3623 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 IGHV3OR16-12A0A075B7B8 117 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 HERVK_113P63121 156 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
KDM2B-216ENST00000543025 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 Q6ZSV7 163 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 STHQ8IWL8 128 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 F8P00451 2351 aa11.92□□□□□ -0.5
KDM2B-216ENST00000543025 TEX49A0A1B0GTD5 131 aa11.91□□□□□ -0.5
KDM2B-216ENST00000543025 COX6A2Q02221 97 aa11.91□□□□□ -0.5
KDM2B-216ENST00000543025 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
KDM2B-216ENST00000543025 TRGV1A0A0A0MS02 117 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 HIST2H2BDQ6DRA6 164 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 DAND5Q8N907 189 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 MTORP42345 2549 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
KDM2B-216ENST00000543025 C1orf158Q8N1D5 194 aa11.9□□□□□ -0.5
KDM2B-216ENST00000543025 TRAV25A0A0B4J276 109 aa11.89□□□□□ -0.51
KDM2B-216ENST00000543025 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
KDM2B-216ENST00000543025 H3BT86 120 aa11.89□□□□□ -0.51
KDM2B-216ENST00000543025 H7C423 109 aa11.89□□□□□ -0.51
KDM2B-216ENST00000543025 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
KDM2B-216ENST00000543025 FAM19A3Q7Z5A8 133 aa11.89□□□□□ -0.51
KDM2B-216ENST00000543025 LST1O00453 97 aa11.88□□□□□ -0.51
KDM2B-216ENST00000543025 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
KDM2B-216ENST00000543025 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
KDM2B-216ENST00000543025 Q9H8V8 135 aa11.88□□□□□ -0.51
KDM2B-216ENST00000543025 CSDC2Q9Y534 153 aaKnown RBP11.88□□□□□ -0.51
KDM2B-216ENST00000543025 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
KDM2B-216ENST00000543025 LINC00694P0DN24 101 aa11.88□□□□□ -0.51
KDM2B-216ENST00000543025 CLEC2BQ92478 149 aa11.88□□□□□ -0.51
KDM2B-216ENST00000543025 DNAJC9-AS1A6NH13 148 aa11.87□□□□□ -0.51
KDM2B-216ENST00000543025 K7EQD1 137 aa11.87□□□□□ -0.51
KDM2B-216ENST00000543025 ESM1Q9NQ30 184 aa11.87□□□□□ -0.51
KDM2B-216ENST00000543025 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
KDM2B-216ENST00000543025 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
KDM2B-216ENST00000543025 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
KDM2B-216ENST00000543025 CITED1Q99966 193 aa11.87□□□□□ -0.51
KDM2B-216ENST00000543025 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
KDM2B-216ENST00000543025 FN1P02751 2386 aaKnown RBP11.86□□□□□ -0.51
KDM2B-216ENST00000543025 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
KDM2B-216ENST00000543025 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
KDM2B-216ENST00000543025 SNCGO76070 127 aa11.86□□□□□ -0.51
KDM2B-216ENST00000543025 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
KDM2B-216ENST00000543025 CRLF1O75462 422 aa11.85□□□□□ -0.51
KDM2B-216ENST00000543025 NTM-AS1Q6ZSK4 140 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms