RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 ZNF256Q9Y2P7 627 aaPredicted RBP3.82□□□□□ -1.8
ZEB1-208ENST00000542815 IGLV2-18A0A075B6J9 118 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 IGHV7-4-1A0A0J9YVY3 117 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 TINCRA0A1B0GVN0 87 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 RNASE4P34096 147 aaKnown RBP3.82□□□□□ -1.8
ZEB1-208ENST00000542815 SUMO2P61956 95 aaKnown RBP3.82□□□□□ -1.8
ZEB1-208ENST00000542815 LY6EQ16553 131 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 Q6ZQT7 251 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 APRG1Q8IVJ8 170 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 MUC7Q8TAX7 377 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 HIST1H4GQ99525 98 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 IGKV3-7A0A075B6H7 116 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 IGKV2D-26A0A0A0MRZ7 120 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 UBE2D3P61077 147 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 TMEM258P61165 79 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 HERVK_113P61574 105 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 UBE2D2P62837 147 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 NSUN5P1Q3KNT7 163 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 CEND1Q8N111 149 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 C1orf158Q8N1D5 194 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 C3orf22Q8N5N4 141 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
ZEB1-208ENST00000542815 NRACQ8N912 160 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 SMIM2Q9BVW6 85 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
ZEB1-208ENST00000542815 NACAE9PAV3 2078 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 A0A0U1RRA0 63 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 F8VRH5 84 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 CCL24O00175 119 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 PF4P02776 101 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 MGPP08493 103 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 SMCPP49901 116 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-208ENST00000542815 DLX4Q92988 240 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-208ENST00000542815 CARD19Q96LW7 228 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 DSCR8Q96T75 97 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 TRAV12-1A0A0B4J245 112 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 TRAV4A0A0B4J268 109 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 IGHV3-11P01762 117 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 P0DMU3 169 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 C15orf53Q8NAA6 179 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 PLEKHB2Q96CS7 222 aa3.81□□□□□ -1.8
ZEB1-208ENST00000542815 CSMD3Q7Z407 3707 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 LINC01549A6NIU2 74 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 FXYD2P54710 66 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 UNQ9165/PRO28630Q6UXU0 137 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 NFE4Q86UQ8 179 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 RHPN1-AS1Q9BWJ2 59 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 VPS13DQ5THJ4 4388 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 F5H697 171 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 IGLV1-51P01701 117 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 LGALS1P09382 135 aaKnown RBP3.8□□□□□ -1.8
ZEB1-208ENST00000542815 CXCL5P42830 114 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 Q5XG85 94 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 SDIM1Q6ZPB5 146 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 Q8N1Y9 231 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 ZFAND2AQ8N6M9 145 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 TOMM6Q96B49 74 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 C20orf173Q96LM9 149 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 TGP01266 2768 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 HERC2O95714 4834 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 GNRH2O43555 120 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 MED14OSP0DP75 135 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
ZEB1-208ENST00000542815 DAZ1Q9NQZ3 744 aaKnown RBP3.8□□□□□ -1.8
ZEB1-208ENST00000542815 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 PAPPA-AS1Q5QFB9 102 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 SCGB1D4Q6XE38 83 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 MAPKAPK5-AS1Q8N8E1 139 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 SPRY2O43597 315 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 TRBV12-3P01733 135 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
ZEB1-208ENST00000542815 C12orf74Q32Q52 190 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 PRR9Q5T870 116 aa3.79□□□□□ -1.8
ZEB1-208ENST00000542815 F6UB75 175 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 VCYO14598 125 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 POM121L12Q8N7R1 296 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 NEXN-AS1Q8NBZ9 246 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
ZEB1-208ENST00000542815 FAT2Q9NYQ8 4349 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 LGALS9O00182 355 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 HERVK_113P63121 156 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 ZNF56Q15929 161 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 KLHL30-AS1Q8NEE0 82 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 TP53TG1Q9Y2A0 90 aa3.78□□□□□ -1.8
ZEB1-208ENST00000542815 K7EMT4 169 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 ACYP1P07311 99 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 CD7P09564 240 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 INAFM2P0DMQ5 153 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 DEFB1P60022 68 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 SNRPD3P62318 126 aaKnown RBP3.78□□□□□ -1.81
ZEB1-208ENST00000542815 Q1RN00 199 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 GPHB5Q86YW7 130 aa3.78□□□□□ -1.81
ZEB1-208ENST00000542815 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
ZEB1-208ENST00000542815 TRBV7-3A0A075B6L6 115 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms