RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 LRP1BQ9NZR2 4599 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 HCG22E2RYF7 251 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 SPRR1BP22528 89 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 TPPP2P59282 170 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 SMCO1Q147U7 214 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 ALX1Q15699 326 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 KRTAP19-8Q3LI54 63 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 TTC9CQ8N5M4 171 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 TSTD1Q8NFU3 115 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 SDF2Q99470 211 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 BIRC6Q9NR09 4857 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 PI4KAP42356 2102 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 ZNF518AQ6AHZ1 1483 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 PXDNQ92626 1479 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 SBF2Q86WG5 1849 aa-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.43□□□□□ -2.48
KNTC1-213ENST00000542727 LRP6O75581 1613 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 CHD6Q8TD26 2715 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 I3L2K1 104 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 UQCR11O14957 56 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 PITX3O75364 302 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 COPZ1P61923 177 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 BAGE2Q86Y30 109 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 CCDC167Q9P0B6 97 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 COPZ2Q9P299 210 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 MRC1P22897 1456 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 MYH7P12883 1935 aa-0.44□□□□□ -2.48
KNTC1-213ENST00000542727 PIEZO2Q9H5I5 2752 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 EP300Q09472 2414 aaPredicted RBP-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 PRG4Q92954 1404 aaPredicted RBP-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 FAT3Q8TDW7 4589 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 HIVEP1P15822 2718 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 SPAARA0A1B0GVQ0 90 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 F8VRH5 84 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 M0R2T5 61 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 RBM3P98179 157 aaKnown RBP-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 C12orf73Q69YU5 71 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 TMEM191AQ9H0A3 160 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 LAMA5O15230 3695 aa-0.45□□□□□ -2.48
KNTC1-213ENST00000542727 FHAD1B1AJZ9 1412 aa-0.46□□□□□ -2.48
KNTC1-213ENST00000542727 POLA1P09884 1462 aaPredicted RBP-0.46□□□□□ -2.48
KNTC1-213ENST00000542727 PDCD10Q9BUL8 212 aa-0.46□□□□□ -2.48
KNTC1-213ENST00000542727 ADGRB1O14514 1584 aa-0.46□□□□□ -2.48
KNTC1-213ENST00000542727 WNK1Q9H4A3 2382 aa-0.46□□□□□ -2.48
KNTC1-213ENST00000542727 PPIP5K1Q6PFW1 1433 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 LRRC37A2A6NM11 1700 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 SHANK2Q9UPX8 1470 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 MAP1BP46821 2468 aaKnown RBP-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 LOC285095A0A1B0GVY8 99 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 SYS1-DBNDD2H3BUS1 97 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 RPS25P62851 125 aaKnown RBP-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 Q6AWC8 147 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 AKAP14Q86UN6 197 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 AMELXQ99217 191 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 PFDN5Q99471 154 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 MGST2Q99735 147 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 DYNLRB1Q9NP97 96 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 SPTBN4Q9H254 2564 aa-0.47□□□□□ -2.48
KNTC1-213ENST00000542727 ANKRD30AQ9BXX3 1397 aa-0.47□□□□□ -2.49
KNTC1-213ENST00000542727 LAMC1P11047 1609 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 COX8AP10176 69 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 HIST1H1DP16402 221 aaKnown RBP-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 B2MP61769 119 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 DEFB123Q8N688 67 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 DEFB105AQ8NG35 78 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 ANP32BQ92688 251 aaKnown RBP-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 FAIMQ9NVQ4 179 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 ARAP2Q8WZ64 1704 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 PSME4Q14997 1843 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 DSPP15924 2871 aaKnown RBP-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 GAPVD1Q14C86 1478 aa-0.48□□□□□ -2.49
KNTC1-213ENST00000542727 DNHD1Q96M86 4753 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 ITPR3Q14573 2671 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 NBEAL1Q6ZS30 2694 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 TGP01266 2768 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 TRBV7-4A0A0J9YYF1 115 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 IGLC7A0M8Q6 106 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 ARPC5O15511 151 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 MGPP08493 103 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 DR1Q01658 176 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 USMG5Q96IX5 58 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 LINC00472Q9H8W2 130 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 NDUFA4L2Q9NRX3 87 aa-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 FLNBO75369 2602 aaKnown RBP-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 MAP1AP78559 2803 aaPredicted RBP-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 KDM5AP29375 1690 aaKnown RBP-0.49□□□□□ -2.49
KNTC1-213ENST00000542727 BTAF1O14981 1849 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 TRBV7-3A0A075B6L6 115 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 FAM25AB3EWG3 89 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 FAM25CB3EWG5 89 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 FAM25GB3EWG6 89 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 SFT2D2O95562 160 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 IFNGP01579 166 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 ARPC4P59998 168 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 UBA52P62987 128 aaKnown RBP-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 WHAMMP3Q1A5X7 153 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 SMIM21Q3B7S5 101 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 MRPL54Q6P161 138 aaKnown RBP-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 FDCSPQ8NFU4 85 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 DPH3Q96FX2 82 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms