RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 CR1P17927 2039 aa8.21□□□□□ -1.09
CDH3-203ENST00000542274 TEX15Q9BXT5 2789 aa8.21□□□□□ -1.09
CDH3-203ENST00000542274 C8orf87E5RJ46 101 aa8.21□□□□□ -1.09
CDH3-203ENST00000542274 MINOS1Q5TGZ0 78 aa8.21□□□□□ -1.09
CDH3-203ENST00000542274 MINOS1-NBL1R4GNA1 71 aa8.21□□□□□ -1.09
CDH3-203ENST00000542274 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 TRBV19A0A075B6N1 114 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 IGHV4-38-2P0DP08 117 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 CUBNO60494 3623 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 LINC01546A6NGU7 62 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 H3BRN7 92 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 PRNTQ86SH4 94 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 CLEC2BQ92478 149 aa8.2□□□□□ -1.1
CDH3-203ENST00000542274 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 GHRHP01286 108 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 TRAV8-3A0A0A6YYJ7 113 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 CCL24O00175 119 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 MSMBP08118 114 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 Q8N2B8 174 aa8.19□□□□□ -1.1
CDH3-203ENST00000542274 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 CTSGP08311 255 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 LGALS3P17931 250 aaKnown RBP8.18□□□□□ -1.1
CDH3-203ENST00000542274 C15orf32Q32M92 178 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
CDH3-203ENST00000542274 IGHV3-49A0A0A0MS15 119 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 SH2D1AO60880 128 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 VPREB1P12018 145 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 LY6EQ16553 131 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 CD164L2Q6UWJ8 174 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 UNC79Q9P2D8 2635 aa8.18□□□□□ -1.1
CDH3-203ENST00000542274 SONP18583 2426 aaKnown RBP8.17□□□□□ -1.1
CDH3-203ENST00000542274 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
CDH3-203ENST00000542274 A0A096LNT2 108 aa8.17□□□□□ -1.1
CDH3-203ENST00000542274 LST1O00453 97 aa8.17□□□□□ -1.1
CDH3-203ENST00000542274 DEFB113Q30KQ7 82 aa8.17□□□□□ -1.1
CDH3-203ENST00000542274 Q86TA4 180 aa8.17□□□□□ -1.1
CDH3-203ENST00000542274 IGHV1-69DA0A0B4J2H0 117 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 IGHV1-69P01742 117 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 TMEM14CQ9P0S9 112 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 CLEC19AQ6UXS0 136 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 PSMG3-AS1Q96PY0 264 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 ICOSQ9Y6W8 199 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 ACANP16112 2415 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 PDZD2O15018 2839 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 B4DSR2 109 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 COX6CP09669 75 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 DSCR9P59020 149 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 C5orf56Q8N8D9 126 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 C8orf49Q96NF6 230 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
CDH3-203ENST00000542274 IGKV2-40A0A087WW87 121 aaPredicted RBP8.15□□□□□ -1.1
CDH3-203ENST00000542274 IGKV2D-40P01614 121 aaPredicted RBP8.15□□□□□ -1.1
CDH3-203ENST00000542274 TMEM75Q8N9X5 138 aa8.15□□□□□ -1.1
CDH3-203ENST00000542274 CCDC140Q96MF4 163 aa8.15□□□□□ -1.1
CDH3-203ENST00000542274 NACAE9PAV3 2078 aa8.15□□□□□ -1.11
CDH3-203ENST00000542274 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.11
CDH3-203ENST00000542274 Q6JHZ5 121 aa8.15□□□□□ -1.11
CDH3-203ENST00000542274 GAS8-AS1O95177 125 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 CRIP1P50238 77 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 LYZL1Q6UWQ5 148 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 DAND5Q8N907 189 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 Q8TAT8 98 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
CDH3-203ENST00000542274 ADARB2-AS1A8MUL3 147 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 F8WEM9 126 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
CDH3-203ENST00000542274 NOTCH2Q04721 2471 aa8.13□□□□□ -1.11
CDH3-203ENST00000542274 KRTAP1-3Q8IUG1 177 aa8.13□□□□□ -1.11
CDH3-203ENST00000542274 LINC01356Q8N9X3 169 aa8.13□□□□□ -1.11
CDH3-203ENST00000542274 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
CDH3-203ENST00000542274 BLCAPP62952 87 aa8.13□□□□□ -1.11
CDH3-203ENST00000542274 PRR25Q96S07 402 aa8.13□□□□□ -1.11
CDH3-203ENST00000542274 H3BUX3 64 aa8.12□□□□□ -1.11
CDH3-203ENST00000542274 A0A087WWL8 130 aa8.12□□□□□ -1.11
CDH3-203ENST00000542274 M0R378 163 aa8.12□□□□□ -1.11
CDH3-203ENST00000542274 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
CDH3-203ENST00000542274 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
CDH3-203ENST00000542274 CLPSL1A2RUU4 121 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 PRAC2D3DTV9 90 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 TIMM17AQ99595 171 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 A0A087WZ39 114 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
CDH3-203ENST00000542274 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
CDH3-203ENST00000542274 KLKP1Q107X0 134 aa8.1□□□□□ -1.11
CDH3-203ENST00000542274 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
CDH3-203ENST00000542274 KLK15Q9H2R5 256 aa8.1□□□□□ -1.11
CDH3-203ENST00000542274 ZNF80P51504 273 aaPredicted RBP8.09□□□□□ -1.11
CDH3-203ENST00000542274 LAGE3Q14657 143 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms