RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 IFITM1P13164 125 aa0.22□□□□□ -2.37
C12orf56-204ENST00000541802 HAMPP81172 84 aa0.22□□□□□ -2.37
C12orf56-204ENST00000541802 MRPS10P82664 201 aaKnown RBP0.22□□□□□ -2.37
C12orf56-204ENST00000541802 TMEM170BQ5T4T1 132 aa0.22□□□□□ -2.37
C12orf56-204ENST00000541802 FAM213BQ8TBF2 198 aa0.22□□□□□ -2.37
C12orf56-204ENST00000541802 LINC01558Q9Y6Z2 57 aa0.22□□□□□ -2.37
C12orf56-204ENST00000541802 LRP1Q07954 4544 aaKnown RBP0.22□□□□□ -2.37
C12orf56-204ENST00000541802 IGSF10Q6WRI0 2623 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 ROBO1Q9Y6N7 1651 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 ANKHD1Q8IWZ3 2542 aaKnown RBP0.21□□□□□ -2.38
C12orf56-204ENST00000541802 LOC285095A0A1B0GVY8 99 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 UQCR11O14957 56 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 ATP5EP56381 51 aaPredicted RBP0.21□□□□□ -2.38
C12orf56-204ENST00000541802 GNG11P61952 73 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 COX17Q14061 63 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 LINC00472Q9H8W2 130 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 DOCK2Q92608 1830 aa0.21□□□□□ -2.38
C12orf56-204ENST00000541802 ZNF236Q9UL36 1845 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 BCE1O60756 84 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 APOC3P02656 99 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 DCDP81605 110 aaKnown RBP0.2□□□□□ -2.38
C12orf56-204ENST00000541802 CNFNQ9BYD5 112 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 PRO0255Q9UI72 69 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 WDR7Q9Y4E6 1490 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 C2CD3Q4AC94 2353 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 C10orf71Q711Q0 1435 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 NCOA3Q9Y6Q9 1424 aa0.2□□□□□ -2.38
C12orf56-204ENST00000541802 PLCE1Q9P212 2302 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 C20orf202A1L168 122 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 SFT2D2O95562 160 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 S100PP25815 95 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 WHAMMP3Q1A5X7 153 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 Q6JHZ5 121 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 GTF2H5Q6ZYL4 71 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 UQCR10Q9UDW1 63 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 SCAPERQ9BY12 1400 aa0.19□□□□□ -2.38
C12orf56-204ENST00000541802 UBR5O95071 2799 aaPredicted RBP0.18□□□□□ -2.38
C12orf56-204ENST00000541802 CUL7Q14999 1698 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 NCOR2Q9Y618 2525 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 PSME4Q14997 1843 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 PZPP20742 1482 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 TRAV22A0A0B4J277 110 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 S100A3P33764 101 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 HSD52Q0P140 79 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 NXT2Q9NPJ8 142 aaKnown RBP0.18□□□□□ -2.38
C12orf56-204ENST00000541802 MANBALQ9NQG1 85 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 CDC42SE2Q9NRR3 84 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 STAB1Q9NY15 2570 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 EIF4G3O43432 1585 aaKnown RBP0.18□□□□□ -2.38
C12orf56-204ENST00000541802 CELSR1Q9NYQ6 3014 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 PTPRQQ9UMZ3 2332 aa0.18□□□□□ -2.38
C12orf56-204ENST00000541802 IGLC1P0CG04 106 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 SNCAP37840 140 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 Q0VG73 95 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 AKAP6Q13023 2319 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 FAM167A-AS1Q96KT0 104 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 SPCS1Q9Y6A9 102 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
C12orf56-204ENST00000541802 CSMD3Q7Z407 3707 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 PLXNB2O15031 1838 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 WNK3Q9BYP7 1800 aa0.17□□□□□ -2.38
C12orf56-204ENST00000541802 GOLGA4Q13439 2230 aaKnown RBP0.17□□□□□ -2.38
C12orf56-204ENST00000541802 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
C12orf56-204ENST00000541802 ERCC6L2Q5T890 1561 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 ZFHX3Q15911 3703 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 NAP1L6A6NFF2 107 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 H3BQ15 152 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 SFTA2Q6UW10 78 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 U3KQA8 63 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 ARL2-SNX15V9GYD0 113 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 RIMS1Q86UR5 1692 aaKnown RBP0.16□□□□□ -2.38
C12orf56-204ENST00000541802 KDM3BQ7LBC6 1761 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 LRP6O75581 1613 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 COL6A3P12111 3177 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 LRRC37A2A6NM11 1700 aa0.16□□□□□ -2.38
C12orf56-204ENST00000541802 HRNRQ86YZ3 2850 aaPredicted RBP0.16□□□□□ -2.38
C12orf56-204ENST00000541802 SPTBN4Q9H254 2564 aa0.15□□□□□ -2.38
C12orf56-204ENST00000541802 KMT2CQ8NEZ4 4911 aaKnown RBP0.15□□□□□ -2.38
C12orf56-204ENST00000541802 KIF21AQ7Z4S6 1674 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 MAPKBP1O60336 1514 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 MUC2Q02817 5179 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 M0R3E3 92 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 CFDP00746 253 aaPredicted RBP0.15□□□□□ -2.39
C12orf56-204ENST00000541802 MGPP08493 103 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 TRAPPC2P0DI81 140 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 TRAPPC2BP0DI82 140 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 UBE2D3P61077 147 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 UBE2D2P62837 147 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 FAM223AQ8IWN6 122 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 Q8IZM0 81 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 TP53AIP1Q9HCN2 124 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 FAIMQ9NVQ4 179 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 NEBP20929 6669 aa0.15□□□□□ -2.39
C12orf56-204ENST00000541802 FAM135AQ9P2D6 1515 aa0.14□□□□□ -2.39
C12orf56-204ENST00000541802 HIVEP3Q5T1R4 2406 aa0.14□□□□□ -2.39
C12orf56-204ENST00000541802 LAMC1P11047 1609 aa0.14□□□□□ -2.39
C12orf56-204ENST00000541802 SHROOM2Q13796 1616 aa0.14□□□□□ -2.39
C12orf56-204ENST00000541802 C10orf142B7Z368 130 aa0.14□□□□□ -2.39
C12orf56-204ENST00000541802 TMEM262E9PQX1 116 aa0.14□□□□□ -2.39
C12orf56-204ENST00000541802 I3L2K1 104 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms