RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 K7EQD1 137 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 IGLV1-51P01701 117 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
LMO3-227ENST00000541764 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 RPL36AP83881 106 aaKnown RBP7.1□□□□□ -1.27
LMO3-227ENST00000541764 TNP2Q05952 138 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 CEMP1Q6PRD7 247 aaPredicted RBP7.1□□□□□ -1.27
LMO3-227ENST00000541764 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 RPL36ALQ969Q0 106 aaKnown RBP7.1□□□□□ -1.27
LMO3-227ENST00000541764 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
LMO3-227ENST00000541764 C1QTNF4Q9BXJ3 329 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 GTSF1LQ9H1H1 148 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 C19orf73Q9NVV2 129 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 MAP1AP78559 2803 aaPredicted RBP7.09□□□□□ -1.27
LMO3-227ENST00000541764 TRBV30A0A0K0K1B3 111 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 H7C423 109 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 NDUFA1O15239 70 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 TCL1BO95988 128 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 PSMB2P49721 201 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 HERVK_113P63121 156 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 MIAQ16674 131 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 SH2D6Q7Z4S9 175 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 C16orf74Q96GX8 76 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 OVOL2Q9BRP0 275 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 GEMIN7Q9H840 131 aaKnown RBP7.09□□□□□ -1.27
LMO3-227ENST00000541764 YAE1D1Q9NRH1 226 aa7.09□□□□□ -1.27
LMO3-227ENST00000541764 TRGV1A0A0A0MS02 117 aa7.08□□□□□ -1.28
LMO3-227ENST00000541764 TRAV8-3A0A0A6YYJ7 113 aa7.08□□□□□ -1.28
LMO3-227ENST00000541764 FOXI1Q12951 378 aa7.08□□□□□ -1.28
LMO3-227ENST00000541764 TEX15Q9BXT5 2789 aa7.08□□□□□ -1.28
LMO3-227ENST00000541764 AKAP9Q99996 3911 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 ZFYVE26Q68DK2 2539 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 IGHV3-64A0A075B6Q5 118 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 IGHV3OR16-12A0A075B7B8 117 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 PLAC8L1A1L4L8 177 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 C21orf62-AS1Q17RA5 79 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 CSMD2Q7Z408 3487 aa7.07□□□□□ -1.28
LMO3-227ENST00000541764 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 TRBV6-4A0A1B0GX49 114 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 HILS1P60008 231 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 LINC00242Q5T6M2 205 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 NTM-AS1Q6ZSK4 140 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 Q6ZTI0 123 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 CSNK1G2-AS1Q8NCQ2 148 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 PPDPFLQ8WWR9 84 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 SIGMAR1Q99720 223 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 CDKN2A-AS1Q9UH64 79 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 ANK3Q12955 4377 aaKnown RBP7.06□□□□□ -1.28
LMO3-227ENST00000541764 APCP25054 2843 aa7.06□□□□□ -1.28
LMO3-227ENST00000541764 A0A1W2PRX2 142 aa7.05□□□□□ -1.28
LMO3-227ENST00000541764 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
LMO3-227ENST00000541764 SCGB1C2P0DMR2 95 aa7.05□□□□□ -1.28
LMO3-227ENST00000541764 RNASE13Q5GAN3 156 aaKnown RBP7.05□□□□□ -1.28
LMO3-227ENST00000541764 ADAMTSL4-AS1Q5T5F5 129 aa7.05□□□□□ -1.28
LMO3-227ENST00000541764 ZNF418Q8TF45 676 aaPredicted RBP7.05□□□□□ -1.28
LMO3-227ENST00000541764 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
LMO3-227ENST00000541764 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.04□□□□□ -1.28
LMO3-227ENST00000541764 COPS9Q8WXC6 57 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 LINC00694P0DN24 101 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
LMO3-227ENST00000541764 ATXN8Q156A1 80 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 MTURNQ8N3F0 131 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 C11orf44Q8N8P7 122 aa7.04□□□□□ -1.28
LMO3-227ENST00000541764 CENPEQ02224 2701 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 MYO9AB2RTY4 2548 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 F5H768 121 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 INSL3P51460 131 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 HERV-K104P63124 156 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 COX6A2Q02221 97 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 HIST2H2BDQ6DRA6 164 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 CARD19Q96LW7 228 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 TMEM243Q9BU79 118 aa7.03□□□□□ -1.28
LMO3-227ENST00000541764 NOP10Q9NPE3 64 aaKnown RBP7.03□□□□□ -1.28
LMO3-227ENST00000541764 ITPR3Q14573 2671 aa7.02□□□□□ -1.28
LMO3-227ENST00000541764 SLC25A20O43772 301 aa7.02□□□□□ -1.29
LMO3-227ENST00000541764 PRSS2P07478 247 aa7.02□□□□□ -1.29
LMO3-227ENST00000541764 PLA2G2AP14555 144 aa7.02□□□□□ -1.29
LMO3-227ENST00000541764 LINC01620Q4KN68 170 aa7.02□□□□□ -1.29
LMO3-227ENST00000541764 SFTA2Q6UW10 78 aa7.02□□□□□ -1.29
LMO3-227ENST00000541764 LINC00612Q8N6U2 182 aa7.02□□□□□ -1.29
LMO3-227ENST00000541764 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
LMO3-227ENST00000541764 TRBV10-2A0A0K0K1G8 114 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 J3QKU1 62 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 TRIAP1O43715 76 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 COX6CP09669 75 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 GAGE4Q13068 117 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 GAGE5Q13069 117 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 KIR2DL5BQ8NHK3 375 aa7.01□□□□□ -1.29
LMO3-227ENST00000541764 ICOSQ9Y6W8 199 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms