RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SPANXA1Q9NS26 97 aa8.56□□□□□ -1.04
AP003559.1-201ENST00000540906 PRO0255Q9UI72 69 aa8.56□□□□□ -1.04
AP003559.1-201ENST00000540906 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
AP003559.1-201ENST00000540906 HTN3P15516 51 aa8.55□□□□□ -1.04
AP003559.1-201ENST00000540906 GTSF1LQ9H1H1 148 aa8.55□□□□□ -1.04
AP003559.1-201ENST00000540906 PAX4O43316 350 aa8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 CHAC1Q9BUX1 264 aa8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 F5H768 121 aa8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 GAGE6Q13070 117 aa8.54□□□□□ -1.04
AP003559.1-201ENST00000540906 TRAV26-1A0A087WT03 109 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 TRAV8-6A0A0B4J262 113 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 M0R143 59 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 ATP5G1P05496 136 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 BATFQ16520 125 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 TMEM243Q9BU79 118 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 TIMM21Q9BVV7 248 aa8.53□□□□□ -1.04
AP003559.1-201ENST00000540906 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.04
AP003559.1-201ENST00000540906 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.04
AP003559.1-201ENST00000540906 TMEM170BQ5T4T1 132 aa8.52□□□□□ -1.04
AP003559.1-201ENST00000540906 MRPL52Q86TS9 123 aaKnown RBP8.52□□□□□ -1.04
AP003559.1-201ENST00000540906 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
AP003559.1-201ENST00000540906 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
AP003559.1-201ENST00000540906 E9PLD3 99 aa8.52□□□□□ -1.05
AP003559.1-201ENST00000540906 DLEU1O43261 78 aa8.52□□□□□ -1.05
AP003559.1-201ENST00000540906 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
AP003559.1-201ENST00000540906 NPSP0C0P6 89 aa8.51□□□□□ -1.05
AP003559.1-201ENST00000540906 UBE2D1P51668 147 aa8.51□□□□□ -1.05
AP003559.1-201ENST00000540906 MPV17L2Q567V2 206 aa8.51□□□□□ -1.05
AP003559.1-201ENST00000540906 MRAPQ8TCY5 172 aa8.51□□□□□ -1.05
AP003559.1-201ENST00000540906 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
AP003559.1-201ENST00000540906 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 COX6A2Q02221 97 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 Q6ZTC4 211 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 DNAH9Q9NYC9 4486 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 C11orf68Q9H3H3 251 aaKnown RBP8.5□□□□□ -1.05
AP003559.1-201ENST00000540906 NANOS2P60321 138 aaKnown RBP8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 Q8N3U1 123 aa8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 OR5A1Q8NGJ0 315 aa8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 CHCHD5Q9BSY4 110 aa8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
AP003559.1-201ENST00000540906 UBE2L6O14933 153 aa8.48□□□□□ -1.05
AP003559.1-201ENST00000540906 BVES-AS1Q5T3Y7 98 aa8.48□□□□□ -1.05
AP003559.1-201ENST00000540906 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
AP003559.1-201ENST00000540906 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 TRAV13-1A0A0B4J241 112 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 LINC00242Q5T6M2 205 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 TM2D3Q9BRN9 247 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 A0A1B0GV90 55 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 CDKN2A-AS1Q9UH64 79 aa8.47□□□□□ -1.05
AP003559.1-201ENST00000540906 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
AP003559.1-201ENST00000540906 H7C423 109 aa8.46□□□□□ -1.06
AP003559.1-201ENST00000540906 SIVA1O15304 175 aa8.46□□□□□ -1.06
AP003559.1-201ENST00000540906 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
AP003559.1-201ENST00000540906 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.06
AP003559.1-201ENST00000540906 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 HERVK_113P61574 105 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 Q6ZVH6 145 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 IGLV5-45A0A087WSX0 123 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 TEX48A0A1B0GUV7 120 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 K7EP13 123 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 TIRAPP58753 221 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
AP003559.1-201ENST00000540906 J3QQQ9 107 aa8.44□□□□□ -1.06
AP003559.1-201ENST00000540906 LEPROTO15243 131 aa8.44□□□□□ -1.06
AP003559.1-201ENST00000540906 RBX1P62877 108 aa8.44□□□□□ -1.06
AP003559.1-201ENST00000540906 HIGD1BQ9P298 99 aa8.44□□□□□ -1.06
AP003559.1-201ENST00000540906 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
AP003559.1-201ENST00000540906 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 ZNF25P17030 456 aaPredicted RBP8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 MRPL23Q16540 153 aaKnown RBP8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 TMEM262E9PQX1 116 aa8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 HSD52Q0P140 79 aa8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
AP003559.1-201ENST00000540906 MEGF8Q7Z7M0 2845 aa8.42□□□□□ -1.06
AP003559.1-201ENST00000540906 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
AP003559.1-201ENST00000540906 FXYD2P54710 66 aa8.41□□□□□ -1.06
AP003559.1-201ENST00000540906 LBHQ53QV2 105 aaPredicted RBP8.41□□□□□ -1.06
AP003559.1-201ENST00000540906 LYPD5Q6UWN5 251 aa8.41□□□□□ -1.06
AP003559.1-201ENST00000540906 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
AP003559.1-201ENST00000540906 HERVK_113P63121 156 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms