RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 IGIPA6NJ69 53 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BCP62807 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST2H2BEQ16778 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.33□□□□□ -0.44
NEK2-205ENST00000540251 LINC00269Q8N2A0 174 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 ZNF664Q8N3J9 261 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BHQ93079 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BNQ99877 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 HIST1H2BMQ99879 126 aa12.33□□□□□ -0.44
NEK2-205ENST00000540251 A0A096LNJ9 63 aa12.32□□□□□ -0.44
NEK2-205ENST00000540251 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
NEK2-205ENST00000540251 REG3AQ06141 175 aa12.32□□□□□ -0.44
NEK2-205ENST00000540251 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
NEK2-205ENST00000540251 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
NEK2-205ENST00000540251 LINC00310P59036 64 aa12.31□□□□□ -0.44
NEK2-205ENST00000540251 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
NEK2-205ENST00000540251 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
NEK2-205ENST00000540251 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
NEK2-205ENST00000540251 RTL8CO15255 209 aa12.3□□□□□ -0.44
NEK2-205ENST00000540251 CCL25O15444 150 aa12.3□□□□□ -0.44
NEK2-205ENST00000540251 ERASQ7Z444 233 aa12.3□□□□□ -0.44
NEK2-205ENST00000540251 BAGE3Q86Y29 109 aa12.3□□□□□ -0.44
NEK2-205ENST00000540251 CRPP02741 224 aa12.29□□□□□ -0.44
NEK2-205ENST00000540251 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
NEK2-205ENST00000540251 RMI2Q96E14 147 aa12.29□□□□□ -0.44
NEK2-205ENST00000540251 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
NEK2-205ENST00000540251 RYR3Q15413 4870 aa12.29□□□□□ -0.44
NEK2-205ENST00000540251 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
NEK2-205ENST00000540251 C1orf196B1AJZ1 125 aa12.28□□□□□ -0.44
NEK2-205ENST00000540251 HBDP02042 147 aa12.28□□□□□ -0.44
NEK2-205ENST00000540251 PDZD11Q5EBL8 140 aa12.28□□□□□ -0.44
NEK2-205ENST00000540251 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
NEK2-205ENST00000540251 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
NEK2-205ENST00000540251 DNAH2Q9P225 4427 aa12.27□□□□□ -0.44
NEK2-205ENST00000540251 Q6ZUT4 128 aa12.27□□□□□ -0.45
NEK2-205ENST00000540251 AMELXQ99217 191 aa12.27□□□□□ -0.45
NEK2-205ENST00000540251 SERF1AO75920 110 aa12.26□□□□□ -0.45
NEK2-205ENST00000540251 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
NEK2-205ENST00000540251 LINC00336Q6ZUF6 198 aa12.26□□□□□ -0.45
NEK2-205ENST00000540251 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
NEK2-205ENST00000540251 SCGB3A1Q96QR1 104 aa12.25□□□□□ -0.45
NEK2-205ENST00000540251 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
NEK2-205ENST00000540251 C1orf43Q9BWL3 253 aa12.25□□□□□ -0.45
NEK2-205ENST00000540251 Q9HAA7 133 aa12.25□□□□□ -0.45
NEK2-205ENST00000540251 HSBP1O75506 76 aa12.24□□□□□ -0.45
NEK2-205ENST00000540251 DNAH17Q9UFH2 4485 aa12.24□□□□□ -0.45
NEK2-205ENST00000540251 NUPR1O60356 82 aa12.23□□□□□ -0.45
NEK2-205ENST00000540251 LINC00173Q6ZV60 143 aa12.23□□□□□ -0.45
NEK2-205ENST00000540251 FAM19A3Q7Z5A8 133 aa12.23□□□□□ -0.45
NEK2-205ENST00000540251 DNAH10Q8IVF4 4471 aa12.22□□□□□ -0.45
NEK2-205ENST00000540251 CLPSL2Q6UWE3 100 aa12.22□□□□□ -0.45
NEK2-205ENST00000540251 Q6ZN92 141 aa12.22□□□□□ -0.45
NEK2-205ENST00000540251 TEX43Q6ZNM6 134 aa12.22□□□□□ -0.45
NEK2-205ENST00000540251 MAPKAPK5-AS1Q8N8E1 139 aa12.22□□□□□ -0.45
NEK2-205ENST00000540251 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.45
NEK2-205ENST00000540251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.45
NEK2-205ENST00000540251 ATP5LO75964 103 aa12.21□□□□□ -0.45
NEK2-205ENST00000540251 SS18Q15532 418 aa12.21□□□□□ -0.45
NEK2-205ENST00000540251 PMCHL1Q16048 86 aa12.21□□□□□ -0.45
NEK2-205ENST00000540251 VCX2Q9H322 139 aa12.21□□□□□ -0.45
NEK2-205ENST00000540251 LRCOL1A6NCL2 159 aa12.2□□□□□ -0.46
NEK2-205ENST00000540251 RNASE13Q5GAN3 156 aaKnown RBP12.2□□□□□ -0.46
NEK2-205ENST00000540251 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
NEK2-205ENST00000540251 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
NEK2-205ENST00000540251 UBE2D1P51668 147 aa12.18□□□□□ -0.46
NEK2-205ENST00000540251 FAM19A2Q8N3H0 131 aa12.18□□□□□ -0.46
NEK2-205ENST00000540251 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
NEK2-205ENST00000540251 PACRGQ96M98 296 aaPredicted RBP12.18□□□□□ -0.46
NEK2-205ENST00000540251 C2orf88Q9BSF0 95 aa12.18□□□□□ -0.46
NEK2-205ENST00000540251 IGLV10-54A0A075B6I4 117 aa12.17□□□□□ -0.46
NEK2-205ENST00000540251 IFITM10A6NMD0 228 aa12.17□□□□□ -0.46
NEK2-205ENST00000540251 PSCAO43653 123 aa12.17□□□□□ -0.46
NEK2-205ENST00000540251 TNP2Q05952 138 aa12.17□□□□□ -0.46
NEK2-205ENST00000540251 FOXI1Q12951 378 aa12.17□□□□□ -0.46
NEK2-205ENST00000540251 PMVKQ15126 192 aa12.17□□□□□ -0.46
NEK2-205ENST00000540251 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
NEK2-205ENST00000540251 IGKV3OR2-268A0A0C4DH90 116 aa12.16□□□□□ -0.46
NEK2-205ENST00000540251 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
NEK2-205ENST00000540251 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
NEK2-205ENST00000540251 A0A087WTM6 91 aa12.15□□□□□ -0.46
NEK2-205ENST00000540251 IGHV3OR16-9A0A0B4J2B5 98 aa12.15□□□□□ -0.46
NEK2-205ENST00000540251 PRSS29PA6NIE9 313 aa12.15□□□□□ -0.46
NEK2-205ENST00000540251 LINC00242Q5T6M2 205 aa12.15□□□□□ -0.46
NEK2-205ENST00000540251 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
NEK2-205ENST00000540251 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
NEK2-205ENST00000540251 NDUFA6P56556 154 aa12.14□□□□□ -0.47
NEK2-205ENST00000540251 SEC11AP67812 179 aa12.14□□□□□ -0.47
NEK2-205ENST00000540251 ZC2HC1BQ5TFG8 222 aa12.14□□□□□ -0.47
NEK2-205ENST00000540251 IFI27L1Q96BM0 104 aa12.14□□□□□ -0.47
NEK2-205ENST00000540251 TRAV12-1A0A0B4J245 112 aa12.13□□□□□ -0.47
NEK2-205ENST00000540251 A0A1B0GVY2 172 aa12.12□□□□□ -0.47
NEK2-205ENST00000540251 XCL1P47992 114 aa12.12□□□□□ -0.47
NEK2-205ENST00000540251 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
NEK2-205ENST00000540251 HSPB8Q9UJY1 196 aa12.12□□□□□ -0.47
NEK2-205ENST00000540251 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms