RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CEMP1Q6PRD7 247 aaPredicted RBP6.49□□□□□ -1.37
DDB1-217ENST00000540166 Q6ZSV7 163 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 ESM1Q9NQ30 184 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 NACAE9PAV3 2078 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 SORL1Q92673 2214 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 NPBQ8NG41 125 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 ZNRF2Q8NHG8 242 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 IGKV3-20P01619 116 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 IGHV3-11P01762 117 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 ELANEP08246 267 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 IGHV3-30-3P0DP02 117 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 SUMO4Q6EEV6 95 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 HRCT1Q6UXD1 115 aa6.49□□□□□ -1.37
DDB1-217ENST00000540166 ZNF625Q96I27 306 aaPredicted RBP6.49□□□□□ -1.37
DDB1-217ENST00000540166 IGHV4-4A0A075B6R2 117 aa6.48□□□□□ -1.37
DDB1-217ENST00000540166 TMEM258P61165 79 aa6.48□□□□□ -1.37
DDB1-217ENST00000540166 LENEPQ9Y5L5 61 aa6.48□□□□□ -1.37
DDB1-217ENST00000540166 TMEM223A0PJW6 202 aa6.48□□□□□ -1.37
DDB1-217ENST00000540166 C9orf47Q6ZRZ4 202 aa6.48□□□□□ -1.37
DDB1-217ENST00000540166 MRPL53Q96EL3 112 aaKnown RBP6.48□□□□□ -1.37
DDB1-217ENST00000540166 IGHV7-81A0A0B4J1V7 117 aa6.48□□□□□ -1.37
DDB1-217ENST00000540166 DAZ2Q13117 558 aaKnown RBP6.47□□□□□ -1.37
DDB1-217ENST00000540166 DAZ4Q86SG3 579 aaKnown RBP6.47□□□□□ -1.37
DDB1-217ENST00000540166 DAND5Q8N907 189 aa6.47□□□□□ -1.37
DDB1-217ENST00000540166 DAZ1Q9NQZ3 744 aaKnown RBP6.47□□□□□ -1.37
DDB1-217ENST00000540166 DAZ3Q9NR90 486 aaKnown RBP6.47□□□□□ -1.37
DDB1-217ENST00000540166 IGIPA6NJ69 53 aa6.47□□□□□ -1.37
DDB1-217ENST00000540166 LY6LH3BQJ8 138 aa6.47□□□□□ -1.37
DDB1-217ENST00000540166 CRYGDP07320 174 aa6.47□□□□□ -1.37
DDB1-217ENST00000540166 DSCR8Q96T75 97 aa6.47□□□□□ -1.37
DDB1-217ENST00000540166 MIAQ16674 131 aa6.46□□□□□ -1.37
DDB1-217ENST00000540166 RNASE13Q5GAN3 156 aaKnown RBP6.46□□□□□ -1.37
DDB1-217ENST00000540166 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.37
DDB1-217ENST00000540166 DYNLRB2Q8TF09 96 aa6.46□□□□□ -1.38
DDB1-217ENST00000540166 JPT2Q9H910 190 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 CXCL5P42830 114 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
DDB1-217ENST00000540166 BLCAPP62952 87 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 RNF152Q8N8N0 203 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 TRBV7-1A0A0A6YYK4 115 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 IGF1P05019 195 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 DEFB1P60022 68 aa6.45□□□□□ -1.38
DDB1-217ENST00000540166 F6UB75 175 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 RPL18AQ02543 176 aaKnown RBP6.44□□□□□ -1.38
DDB1-217ENST00000540166 Q8N9W7 124 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 CR1P17927 2039 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 TMEM61Q8N0U2 210 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 COX7A2LO14548 114 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 CRPP02741 224 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 TSHBP01222 138 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 PRB2P02812 416 aaPredicted RBP6.44□□□□□ -1.38
DDB1-217ENST00000540166 MED14OSP0DP75 135 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 EBI3Q14213 229 aa6.44□□□□□ -1.38
DDB1-217ENST00000540166 RBMY1BA6NDE4 496 aaKnown RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 RBMY1EA6NEQ0 496 aaKnown RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 F8W735 103 aaPredicted RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 SOCS3O14543 225 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 RBMY1DP0C7P1 496 aaKnown RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 RBMY1A1P0DJD3 496 aaKnown RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 RBMY1CP0DJD4 496 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 RBMY1FQ15415 496 aaKnown RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 C20orf203Q8NBC4 194 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 CRYGAP11844 174 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 POLR2KP53803 58 aaKnown RBP6.43□□□□□ -1.38
DDB1-217ENST00000540166 S100A7L2Q5SY68 101 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 PRR9Q5T870 116 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 OVOL2Q9BRP0 275 aa6.43□□□□□ -1.38
DDB1-217ENST00000540166 A0A0J9YX75 114 aa6.42□□□□□ -1.38
DDB1-217ENST00000540166 TIRAPP58753 221 aa6.42□□□□□ -1.38
DDB1-217ENST00000540166 PKIGQ9Y2B9 76 aa6.42□□□□□ -1.38
DDB1-217ENST00000540166 IGHV4OR15-8A0A075B7B6 117 aa6.42□□□□□ -1.38
DDB1-217ENST00000540166 A0A087WW49 117 aa6.42□□□□□ -1.38
DDB1-217ENST00000540166 GPHB5Q86YW7 130 aa6.42□□□□□ -1.38
DDB1-217ENST00000540166 TINCRA0A1B0GVN0 87 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 ZNF415Q09FC8 603 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 Q9H8V8 135 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 Q9HAA7 133 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 PDZD2O15018 2839 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 ODF3BA8MYP8 253 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 NXPH4O95158 308 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 ZFAND3Q9H8U3 227 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 FBN2P35556 2912 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 IGLV4-3A0A075B6K6 122 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 ZFAND2AQ8N6M9 145 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 KIR2DL5BQ8NHK3 375 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms