RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 FAM104AQ969W3 186 aa12.85□□□□□ -0.35
TNFRSF1A-213ENST00000540022 SCGB3A1Q96QR1 104 aa12.85□□□□□ -0.35
TNFRSF1A-213ENST00000540022 OPRPNQ99935 248 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-213ENST00000540022 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
TNFRSF1A-213ENST00000540022 CSDC2Q9Y534 153 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-213ENST00000540022 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
TNFRSF1A-213ENST00000540022 ZNF25P17030 456 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-213ENST00000540022 PKIAP61925 76 aa12.84□□□□□ -0.35
TNFRSF1A-213ENST00000540022 ERASQ7Z444 233 aa12.84□□□□□ -0.35
TNFRSF1A-213ENST00000540022 FABP4P15090 132 aa12.83□□□□□ -0.35
TNFRSF1A-213ENST00000540022 DGAT2L7PQ6IED9 249 aa12.83□□□□□ -0.35
TNFRSF1A-213ENST00000540022 LINC00173Q6ZV60 143 aa12.83□□□□□ -0.35
TNFRSF1A-213ENST00000540022 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.35
TNFRSF1A-213ENST00000540022 DNAH6Q9C0G6 4158 aa12.83□□□□□ -0.36
TNFRSF1A-213ENST00000540022 LEPROTL1O95214 131 aa12.83□□□□□ -0.36
TNFRSF1A-213ENST00000540022 SMAGPQ0VAQ4 97 aa12.83□□□□□ -0.36
TNFRSF1A-213ENST00000540022 Q6ZUT4 128 aa12.83□□□□□ -0.36
TNFRSF1A-213ENST00000540022 TMEM101Q96IK0 257 aa12.83□□□□□ -0.36
TNFRSF1A-213ENST00000540022 TIMM17AQ99595 171 aa12.83□□□□□ -0.36
TNFRSF1A-213ENST00000540022 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
TNFRSF1A-213ENST00000540022 CDC42SE2Q9NRR3 84 aa12.82□□□□□ -0.36
TNFRSF1A-213ENST00000540022 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-213ENST00000540022 TMEM141Q96I45 108 aa12.81□□□□□ -0.36
TNFRSF1A-213ENST00000540022 FRAS1Q86XX4 4008 aa12.81□□□□□ -0.36
TNFRSF1A-213ENST00000540022 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
TNFRSF1A-213ENST00000540022 ANGP03950 147 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-213ENST00000540022 MRPS36P82909 103 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-213ENST00000540022 ZNF664Q8N3J9 261 aa12.8□□□□□ -0.36
TNFRSF1A-213ENST00000540022 KLK12Q9UKR0 248 aa12.8□□□□□ -0.36
TNFRSF1A-213ENST00000540022 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-213ENST00000540022 ATP5LO75964 103 aa12.79□□□□□ -0.36
TNFRSF1A-213ENST00000540022 NPSP0C0P6 89 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 S100A2P29034 98 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 ZC2HC1BQ5TFG8 222 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 DNAH10Q8IVF4 4471 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 BAALCQ8WXS3 180 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 HSPB8Q9UJY1 196 aa12.78□□□□□ -0.36
TNFRSF1A-213ENST00000540022 BIRC6Q9NR09 4857 aa12.77□□□□□ -0.37
TNFRSF1A-213ENST00000540022 CLPSL2Q6UWE3 100 aa12.77□□□□□ -0.37
TNFRSF1A-213ENST00000540022 KRTAP1-5Q9BYS1 174 aa12.77□□□□□ -0.37
TNFRSF1A-213ENST00000540022 Q6ZN92 141 aa12.76□□□□□ -0.37
TNFRSF1A-213ENST00000540022 AMELXQ99217 191 aa12.76□□□□□ -0.37
TNFRSF1A-213ENST00000540022 VCX2Q9H322 139 aa12.76□□□□□ -0.37
TNFRSF1A-213ENST00000540022 REG3AQ06141 175 aa12.75□□□□□ -0.37
TNFRSF1A-213ENST00000540022 PRR34Q9NV39 138 aa12.75□□□□□ -0.37
TNFRSF1A-213ENST00000540022 IGKV3OR2-268A0A0C4DH90 116 aa12.74□□□□□ -0.37
TNFRSF1A-213ENST00000540022 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
TNFRSF1A-213ENST00000540022 ENHOQ6UWT2 76 aa12.74□□□□□ -0.37
TNFRSF1A-213ENST00000540022 TEX43Q6ZNM6 134 aa12.74□□□□□ -0.37
TNFRSF1A-213ENST00000540022 UBE2WQ96B02 151 aa12.74□□□□□ -0.37
TNFRSF1A-213ENST00000540022 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
TNFRSF1A-213ENST00000540022 NBDYA0A0U1RRE5 68 aa12.73□□□□□ -0.37
TNFRSF1A-213ENST00000540022 IBA57-AS1B1ANH7 110 aa12.73□□□□□ -0.37
TNFRSF1A-213ENST00000540022 K7EP13 123 aa12.73□□□□□ -0.37
TNFRSF1A-213ENST00000540022 PRSS1P07477 247 aa12.73□□□□□ -0.37
TNFRSF1A-213ENST00000540022 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
TNFRSF1A-213ENST00000540022 PMVKQ15126 192 aa12.72□□□□□ -0.37
TNFRSF1A-213ENST00000540022 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
TNFRSF1A-213ENST00000540022 PRSS29PA6NIE9 313 aa12.72□□□□□ -0.37
TNFRSF1A-213ENST00000540022 CRPP02741 224 aa12.72□□□□□ -0.37
TNFRSF1A-213ENST00000540022 MAP1LC3CQ9BXW4 147 aa12.72□□□□□ -0.37
TNFRSF1A-213ENST00000540022 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
TNFRSF1A-213ENST00000540022 H0Y8G0 127 aa12.71□□□□□ -0.38
TNFRSF1A-213ENST00000540022 C3orf79P0CE67 100 aa12.71□□□□□ -0.38
TNFRSF1A-213ENST00000540022 LINC00959A0A1B0GUT2 108 aa12.7□□□□□ -0.38
TNFRSF1A-213ENST00000540022 M0R2N4 97 aa12.7□□□□□ -0.38
TNFRSF1A-213ENST00000540022 TTC32Q5I0X7 151 aa12.7□□□□□ -0.38
TNFRSF1A-213ENST00000540022 C2orf88Q9BSF0 95 aa12.7□□□□□ -0.38
TNFRSF1A-213ENST00000540022 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
TNFRSF1A-213ENST00000540022 UBE2D1P51668 147 aa12.69□□□□□ -0.38
TNFRSF1A-213ENST00000540022 KRTDAPP60985 99 aa12.69□□□□□ -0.38
TNFRSF1A-213ENST00000540022 Q9HAA7 133 aa12.69□□□□□ -0.38
TNFRSF1A-213ENST00000540022 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
TNFRSF1A-213ENST00000540022 TRAV12-1A0A0B4J245 112 aa12.68□□□□□ -0.38
TNFRSF1A-213ENST00000540022 MIAQ16674 131 aa12.68□□□□□ -0.38
TNFRSF1A-213ENST00000540022 SPATA12Q7Z6I5 190 aa12.68□□□□□ -0.38
TNFRSF1A-213ENST00000540022 Q6ZR54 194 aa12.67□□□□□ -0.38
TNFRSF1A-213ENST00000540022 TRAV8-3A0A0A6YYJ7 113 aa12.67□□□□□ -0.38
TNFRSF1A-213ENST00000540022 A0A0J9YXV3 536 aa12.67□□□□□ -0.38
TNFRSF1A-213ENST00000540022 ODF1Q14990 250 aa12.67□□□□□ -0.38
TNFRSF1A-213ENST00000540022 OR10D4PQ8NGN7 298 aa12.67□□□□□ -0.38
TNFRSF1A-213ENST00000540022 SS18Q15532 418 aa12.66□□□□□ -0.38
TNFRSF1A-213ENST00000540022 LINC00242Q5T6M2 205 aa12.66□□□□□ -0.38
TNFRSF1A-213ENST00000540022 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-213ENST00000540022 IGLV4-69A0A075B6H9 119 aa12.65□□□□□ -0.38
TNFRSF1A-213ENST00000540022 TRAV8-4A0A0B4J246 113 aa12.65□□□□□ -0.38
TNFRSF1A-213ENST00000540022 CCL25O15444 150 aa12.65□□□□□ -0.38
TNFRSF1A-213ENST00000540022 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
TNFRSF1A-213ENST00000540022 CHCHD10Q8WYQ3 142 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-213ENST00000540022 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-213ENST00000540022 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
TNFRSF1A-213ENST00000540022 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
TNFRSF1A-213ENST00000540022 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
TNFRSF1A-213ENST00000540022 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
TNFRSF1A-213ENST00000540022 F8VRH5 84 aa12.63□□□□□ -0.39
TNFRSF1A-213ENST00000540022 XCL1P47992 114 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms