RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 ZNF22P17026 224 aaPredicted RBP7.24□□□□□ -1.25
SPARC-209ENST00000539687 TIRAPP58753 221 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 GAGE4Q13068 117 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 GAGE5Q13069 117 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 GAGE13Q4V321 117 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 LINC00469Q8N7U9 141 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 HIST1H4GQ99525 98 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
SPARC-209ENST00000539687 TP73-AS1Q9UF72 201 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 X6R8D5 127 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 STAB1Q9NY15 2570 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 NBEAL1Q6ZS30 2694 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.23□□□□□ -1.25
SPARC-209ENST00000539687 IGHV3-38A0A0C4DH36 116 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 IGKV2-29A2NJV5 120 aaPredicted RBP7.23□□□□□ -1.25
SPARC-209ENST00000539687 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 HERVK_113P63121 156 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 FHL2Q14192 279 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 AMMECR1LQ6DCA0 310 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 FAM19A3Q7Z5A8 133 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 C3orf56Q8N813 242 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 MAPKAPK5-AS1Q8N8E1 139 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 OR5A1Q8NGJ0 315 aa7.23□□□□□ -1.25
SPARC-209ENST00000539687 SPANXB1Q9NS25 103 aaPredicted RBP7.23□□□□□ -1.25
SPARC-209ENST00000539687 A0A0J9YXV3 536 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 C9orf118A6NHY6 69 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 A8MZ25 164 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 VAMP3Q15836 100 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 SBSPONQ8IVN8 264 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 DEFB104AQ8WTQ1 72 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 PRO0255Q9UI72 69 aa7.22□□□□□ -1.25
SPARC-209ENST00000539687 SORL1Q92673 2214 aa7.21□□□□□ -1.25
SPARC-209ENST00000539687 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 IGHV1-58A0A0C4DH39 117 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 UBE2D1P51668 147 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 EMP1P54849 157 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.26
SPARC-209ENST00000539687 Q6ZUT4 128 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 GTF2H5Q6ZYL4 71 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 SH2D6Q7Z4S9 175 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 OPRPNQ99935 248 aaPredicted RBP7.21□□□□□ -1.26
SPARC-209ENST00000539687 TTTY13Q9BZ97 58 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 ATRQ13535 2644 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 NACAE9PAV3 2078 aa7.21□□□□□ -1.26
SPARC-209ENST00000539687 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 DEFB130BP0DP73 79 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 DEFB130AP0DP74 79 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 UBE2V1Q13404 147 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 KRTAP24-1Q3LI83 254 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 Q6ZVH6 145 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 RNF183Q96D59 192 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 Q9UF83 564 aa7.2□□□□□ -1.26
SPARC-209ENST00000539687 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 A0A0J9YY99 117 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 SPART-AS1P0CW21 52 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 DEFB135Q30KP9 77 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 FAM222AQ5U5X8 452 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 NTM-AS1Q6ZSK4 140 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 ATP6V0E2Q8NHE4 81 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 CUBNO60494 3623 aa7.19□□□□□ -1.26
SPARC-209ENST00000539687 TRAV26-1A0A087WT03 109 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 ATP5G1P05496 136 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 FXYD2P54710 66 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 DAD1P61803 113 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 EGFEM1PQ0D2K5 195 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 CEMP1Q6PRD7 247 aaPredicted RBP7.18□□□□□ -1.26
SPARC-209ENST00000539687 COPS9Q8WXC6 57 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 VSIG2Q96IQ7 327 aa7.18□□□□□ -1.26
SPARC-209ENST00000539687 IGHV4-28A0A0C4DH34 117 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 CCL25O15444 150 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 PAX4O43316 350 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 TIMM17BO60830 172 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 FABP2P12104 132 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 GYPEP15421 78 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
SPARC-209ENST00000539687 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
SPARC-209ENST00000539687 NHP2Q9NX24 153 aaKnown RBP7.17□□□□□ -1.26
SPARC-209ENST00000539687 WNK1Q9H4A3 2382 aa7.16□□□□□ -1.26
SPARC-209ENST00000539687 CIRBPQ14011 172 aaKnown RBP7.16□□□□□ -1.26
SPARC-209ENST00000539687 C12orf74Q32Q52 190 aa7.16□□□□□ -1.26
SPARC-209ENST00000539687 ZFAND6Q6FIF0 208 aa7.16□□□□□ -1.26
SPARC-209ENST00000539687 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
SPARC-209ENST00000539687 Q8NAQ8 132 aa7.16□□□□□ -1.26
SPARC-209ENST00000539687 CHCHD5Q9BSY4 110 aa7.16□□□□□ -1.26
SPARC-209ENST00000539687 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.26
SPARC-209ENST00000539687 A0A1B0GUV1 79 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 A0A1W2PPM0 123 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 GAGE10A6NGK3 116 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 H3BUT2 72 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 TSPEAR-AS2P59090 65 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 LINC00242Q5T6M2 205 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
SPARC-209ENST00000539687 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 202.2 ms