RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 IGHV3-38A0A0C4DH36 116 aa18.02■□□□□ 0.48
KLHL42-202ENST00000539176 TRBV6-4A0A1B0GX49 114 aa18.02■□□□□ 0.48
KLHL42-202ENST00000539176 MRPS36P82909 103 aaKnown RBP18.02■□□□□ 0.48
KLHL42-202ENST00000539176 FAM104AQ969W3 186 aa18.02■□□□□ 0.48
KLHL42-202ENST00000539176 K7EIL1 84 aa18.01■□□□□ 0.47
KLHL42-202ENST00000539176 UBE2D3P61077 147 aa18.01■□□□□ 0.47
KLHL42-202ENST00000539176 UBE2D2P62837 147 aa18.01■□□□□ 0.47
KLHL42-202ENST00000539176 SMAGPQ0VAQ4 97 aa18.01■□□□□ 0.47
KLHL42-202ENST00000539176 KPRPQ5T749 579 aaPredicted RBP18.01■□□□□ 0.47
KLHL42-202ENST00000539176 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18■□□□□ 0.47
KLHL42-202ENST00000539176 TMEM223A0PJW6 202 aa18■□□□□ 0.47
KLHL42-202ENST00000539176 IGKV2-29A2NJV5 120 aaPredicted RBP18■□□□□ 0.47
KLHL42-202ENST00000539176 ZNF22P17026 224 aaPredicted RBP18■□□□□ 0.47
KLHL42-202ENST00000539176 FXYD2P54710 66 aa17.99■□□□□ 0.47
KLHL42-202ENST00000539176 UBE2V1Q13404 147 aa17.99■□□□□ 0.47
KLHL42-202ENST00000539176 HIST1H4GQ99525 98 aa17.99■□□□□ 0.47
KLHL42-202ENST00000539176 Q8NAQ8 132 aa17.99■□□□□ 0.47
KLHL42-202ENST00000539176 A0A0J9YXV3 536 aa17.98■□□□□ 0.47
KLHL42-202ENST00000539176 PTTG1IPP53801 180 aa17.98■□□□□ 0.47
KLHL42-202ENST00000539176 VAMP3Q15836 100 aa17.98■□□□□ 0.47
KLHL42-202ENST00000539176 SCGB1D4Q6XE38 83 aa17.98■□□□□ 0.47
KLHL42-202ENST00000539176 LEPROTO15243 131 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 DEFB130BP0DP73 79 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 DEFB130AP0DP74 79 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 C9orf118A6NHY6 69 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 J3QQQ9 107 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 SMIM13P0DJ93 91 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 GTSF1LQ9H1H1 148 aa17.97■□□□□ 0.47
KLHL42-202ENST00000539176 TINCRA0A1B0GVN0 87 aa17.96■□□□□ 0.47
KLHL42-202ENST00000539176 CEMP1Q6PRD7 247 aaPredicted RBP17.96■□□□□ 0.47
KLHL42-202ENST00000539176 LINC00612Q8N6U2 182 aa17.96■□□□□ 0.47
KLHL42-202ENST00000539176 CSDC2Q9Y534 153 aaKnown RBP17.96■□□□□ 0.47
KLHL42-202ENST00000539176 MIFP14174 115 aa17.95■□□□□ 0.46
KLHL42-202ENST00000539176 LGALS3P17931 250 aaKnown RBP17.95■□□□□ 0.46
KLHL42-202ENST00000539176 FAM222AQ5U5X8 452 aa17.95■□□□□ 0.46
KLHL42-202ENST00000539176 Q6ZUT4 128 aa17.95■□□□□ 0.46
KLHL42-202ENST00000539176 PLEKHB2Q96CS7 222 aa17.95■□□□□ 0.46
KLHL42-202ENST00000539176 TRGV4A0A0C4DH28 118 aa17.95■□□□□ 0.46
KLHL42-202ENST00000539176 DEFB121Q5J5C9 76 aa17.95■□□□□ 0.46
KLHL42-202ENST00000539176 GAGE12JA6NER3 117 aa17.94■□□□□ 0.46
KLHL42-202ENST00000539176 GAGE4Q13068 117 aa17.94■□□□□ 0.46
KLHL42-202ENST00000539176 GAGE5Q13069 117 aa17.94■□□□□ 0.46
KLHL42-202ENST00000539176 GAGE13Q4V321 117 aa17.94■□□□□ 0.46
KLHL42-202ENST00000539176 DGAT2L7PQ6IED9 249 aa17.94■□□□□ 0.46
KLHL42-202ENST00000539176 SBSPONQ8IVN8 264 aa17.93■□□□□ 0.46
KLHL42-202ENST00000539176 TSPEAR-AS2P59090 65 aa17.92■□□□□ 0.46
KLHL42-202ENST00000539176 CELA1Q9UNI1 258 aa17.92■□□□□ 0.46
KLHL42-202ENST00000539176 FHL2Q14192 279 aa17.9■□□□□ 0.46
KLHL42-202ENST00000539176 MRAPQ8TCY5 172 aa17.9■□□□□ 0.46
KLHL42-202ENST00000539176 SPANXB1Q9NS25 103 aaPredicted RBP17.9■□□□□ 0.46
KLHL42-202ENST00000539176 H7C423 109 aa17.9■□□□□ 0.46
KLHL42-202ENST00000539176 CCL25O15444 150 aa17.9■□□□□ 0.46
KLHL42-202ENST00000539176 UBE2D1P51668 147 aa17.9■□□□□ 0.46
KLHL42-202ENST00000539176 NTM-AS1Q6ZSK4 140 aa17.9■□□□□ 0.46
KLHL42-202ENST00000539176 NHP2Q9NX24 153 aaKnown RBP17.9■□□□□ 0.46
KLHL42-202ENST00000539176 A0A0J9YY99 117 aa17.89■□□□□ 0.45
KLHL42-202ENST00000539176 TMEM238LA0A1B0GVL6 79 aa17.89■□□□□ 0.45
KLHL42-202ENST00000539176 A6NJY4 79 aa17.89■□□□□ 0.45
KLHL42-202ENST00000539176 K7EP13 123 aa17.89■□□□□ 0.45
KLHL42-202ENST00000539176 RNASE13Q5GAN3 156 aaKnown RBP17.88■□□□□ 0.45
KLHL42-202ENST00000539176 OR5A1Q8NGJ0 315 aa17.88■□□□□ 0.45
KLHL42-202ENST00000539176 LYRM9A8MSI8 78 aa17.88■□□□□ 0.45
KLHL42-202ENST00000539176 AMMECR1LQ6DCA0 310 aa17.88■□□□□ 0.45
KLHL42-202ENST00000539176 TMEM243Q9BU79 118 aa17.88■□□□□ 0.45
KLHL42-202ENST00000539176 TIRAPP58753 221 aa17.87■□□□□ 0.45
KLHL42-202ENST00000539176 DNHD1Q96M86 4753 aa17.87■□□□□ 0.45
KLHL42-202ENST00000539176 A0A1B0GWB2 263 aa17.86■□□□□ 0.45
KLHL42-202ENST00000539176 LINC00694P0DN24 101 aa17.86■□□□□ 0.45
KLHL42-202ENST00000539176 SRSF9Q13242 221 aaKnown RBP eCLIP17.86■□□□□ 0.45
KLHL42-202ENST00000539176 GEMIN7Q9H840 131 aaKnown RBP17.86■□□□□ 0.45
KLHL42-202ENST00000539176 H3BUT2 72 aa17.86■□□□□ 0.45
KLHL42-202ENST00000539176 FAM19A3Q7Z5A8 133 aa17.86■□□□□ 0.45
KLHL42-202ENST00000539176 RAB37Q96AX2 223 aa17.86■□□□□ 0.45
KLHL42-202ENST00000539176 IGLV5-45A0A087WSX0 123 aa17.85■□□□□ 0.45
KLHL42-202ENST00000539176 IGHV1-58A0A0C4DH39 117 aa17.85■□□□□ 0.45
KLHL42-202ENST00000539176 UBE2L6O14933 153 aa17.84■□□□□ 0.45
KLHL42-202ENST00000539176 IGHV3-30-3P0DP02 117 aa17.84■□□□□ 0.45
KLHL42-202ENST00000539176 GTF2H5Q6ZYL4 71 aa17.84■□□□□ 0.45
KLHL42-202ENST00000539176 DAD1P61803 113 aa17.83■□□□□ 0.44
KLHL42-202ENST00000539176 HERVK_113P63121 156 aa17.83■□□□□ 0.44
KLHL42-202ENST00000539176 C12orf74Q32Q52 190 aa17.83■□□□□ 0.44
KLHL42-202ENST00000539176 TENM3Q9P273 2699 aa17.83■□□□□ 0.44
KLHL42-202ENST00000539176 LOC100131303A0A0U1RQF7 123 aa17.82■□□□□ 0.44
KLHL42-202ENST00000539176 A0A1W2PPM0 123 aa17.82■□□□□ 0.44
KLHL42-202ENST00000539176 TMEM101Q96IK0 257 aa17.82■□□□□ 0.44
KLHL42-202ENST00000539176 SPART-AS1P0CW21 52 aa17.82■□□□□ 0.44
KLHL42-202ENST00000539176 KRTAP21-3Q3LHN1 58 aa17.82■□□□□ 0.44
KLHL42-202ENST00000539176 K7ERJ3 54 aa17.81■□□□□ 0.44
KLHL42-202ENST00000539176 VSIG2Q96IQ7 327 aa17.81■□□□□ 0.44
KLHL42-202ENST00000539176 GAGE10A6NGK3 116 aa17.8■□□□□ 0.44
KLHL42-202ENST00000539176 FABP2P12104 132 aa17.8■□□□□ 0.44
KLHL42-202ENST00000539176 CDC42SE2Q9NRR3 84 aa17.8■□□□□ 0.44
KLHL42-202ENST00000539176 IGHV3-64A0A075B6Q5 118 aa17.8■□□□□ 0.44
KLHL42-202ENST00000539176 TRBV6-8A0A0A6YYG3 113 aa17.78■□□□□ 0.44
KLHL42-202ENST00000539176 TMEM238C9JI98 176 aa17.78■□□□□ 0.44
KLHL42-202ENST00000539176 K7EP34 96 aa17.78■□□□□ 0.44
KLHL42-202ENST00000539176 TM2D3Q9BRN9 247 aa17.78■□□□□ 0.44
KLHL42-202ENST00000539176 A0A0J9YWU9 116 aa17.77■□□□□ 0.43
KLHL42-202ENST00000539176 IGHV3-30P01768 117 aa17.77■□□□□ 0.43
KLHL42-202ENST00000539176 IGHV3-30-5P0DP03 117 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms