RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 Q6ZN92 141 aa5.83□□□□□ -1.48
LPCAT3-208ENST00000538987 ERASQ7Z444 233 aa5.83□□□□□ -1.48
LPCAT3-208ENST00000538987 OPRPNQ99935 248 aaPredicted RBP5.83□□□□□ -1.48
LPCAT3-208ENST00000538987 TIMM21Q9BVV7 248 aa5.83□□□□□ -1.48
LPCAT3-208ENST00000538987 CDC42SE2Q9NRR3 84 aa5.83□□□□□ -1.48
LPCAT3-208ENST00000538987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 NUPR1O60356 82 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 FABP4P15090 132 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 REG3AQ06141 175 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 PAPPA-AS1Q5QFB9 102 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 TMEM141Q96I45 108 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 VCX2Q9H322 139 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 PYGO1Q9Y3Y4 419 aa5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
LPCAT3-208ENST00000538987 CSMD3Q7Z407 3707 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 TRAV8-3A0A0A6YYJ7 113 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 ATP5LO75964 103 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 SS18Q15532 418 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 PDZD11Q5EBL8 140 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 Q6ZUT4 128 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 RMI2Q96E14 147 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 C2orf88Q9BSF0 95 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
LPCAT3-208ENST00000538987 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 IGLV4-3A0A075B6K6 122 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 IGKV2D-24A0A075B6R9 120 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 TRAV13-1A0A0B4J241 112 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 IGIPA6NJ69 53 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 IFITM10A6NMD0 228 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 PSCAO43653 123 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 PRSS1P07477 247 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 LINC00310P59036 64 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 MRPS36P82909 103 aaKnown RBP5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 MIAQ16674 131 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 C1orf134Q5TEV5 83 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 ENHOQ6UWT2 76 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 NFE4Q86UQ8 179 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 C1orf43Q9BWL3 253 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
LPCAT3-208ENST00000538987 STARD9Q9P2P6 4700 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 A0A096LNJ9 63 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 TRAV8-4A0A0B4J246 113 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 NPSP0C0P6 89 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 S100A2P29034 98 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 ZC2HC1BQ5TFG8 222 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 C6orf223Q8N319 242 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 PRR34Q9NV39 138 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 HSPB8Q9UJY1 196 aa5.79□□□□□ -1.48
LPCAT3-208ENST00000538987 LINC00959A0A1B0GUT2 108 aa5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 H0Y8G0 127 aa5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 XCL1P47992 114 aa5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 SNRPEP62304 92 aaKnown RBP5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 COA6Q5JTJ3 125 aaKnown RBP5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 Q6ZR54 194 aa5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 IFI27L1Q96BM0 104 aa5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 COX11Q9Y6N1 276 aa5.78□□□□□ -1.48
LPCAT3-208ENST00000538987 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 GAGE12HA6NDE8 117 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 PRSS29PA6NIE9 313 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 CCL25O15444 150 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 PMVKQ15126 192 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 LINC00173Q6ZV60 143 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 BAALCQ8WXS3 180 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 CHCHD10Q8WYQ3 142 aaPredicted RBP5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 MAP1LC3CQ9BXW4 147 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 CST9LQ9H4G1 147 aa5.77□□□□□ -1.49
LPCAT3-208ENST00000538987 FAM104AQ969W3 186 aa5.76□□□□□ -1.49
LPCAT3-208ENST00000538987 AMELXQ99217 191 aa5.76□□□□□ -1.49
LPCAT3-208ENST00000538987 GEMIN7Q9H840 131 aaKnown RBP5.76□□□□□ -1.49
LPCAT3-208ENST00000538987 MALP21145 153 aa5.75□□□□□ -1.49
LPCAT3-208ENST00000538987 UBE2D1P51668 147 aa5.75□□□□□ -1.49
LPCAT3-208ENST00000538987 SEC11AP67812 179 aa5.75□□□□□ -1.49
LPCAT3-208ENST00000538987 HIST3H2BBQ8N257 126 aa5.75□□□□□ -1.49
LPCAT3-208ENST00000538987 CHTOPQ9Y3Y2 248 aaKnown RBP5.75□□□□□ -1.49
LPCAT3-208ENST00000538987 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
LPCAT3-208ENST00000538987 C5orf52A6NGY3 159 aa5.74□□□□□ -1.49
LPCAT3-208ENST00000538987 KRTDAPP60985 99 aa5.74□□□□□ -1.49
LPCAT3-208ENST00000538987 LINC00242Q5T6M2 205 aa5.74□□□□□ -1.49
LPCAT3-208ENST00000538987 CD164L2Q6UWJ8 174 aa5.74□□□□□ -1.49
LPCAT3-208ENST00000538987 C5orf38Q86SI9 138 aa5.74□□□□□ -1.49
LPCAT3-208ENST00000538987 COX7A2LO14548 114 aa5.73□□□□□ -1.49
LPCAT3-208ENST00000538987 LECT2O14960 151 aa5.73□□□□□ -1.49
LPCAT3-208ENST00000538987 HERVK_113P63121 156 aa5.73□□□□□ -1.49
LPCAT3-208ENST00000538987 COX6A2Q02221 97 aa5.73□□□□□ -1.49
LPCAT3-208ENST00000538987 PACRGQ96M98 296 aaPredicted RBP5.73□□□□□ -1.49
LPCAT3-208ENST00000538987 TRAV12-1A0A0B4J245 112 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 TINCRA0A1B0GVN0 87 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 EREGO14944 169 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 FOXI1Q12951 378 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 CFAP161Q6P656 301 aa5.72□□□□□ -1.49
LPCAT3-208ENST00000538987 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms