RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PDPNQ86YL7 162 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ATOH7Q8N100 152 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 C6orf223Q8N319 242 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 SIGLECL1Q8N7X8 197 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF491Q8N8L2 437 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 C11orf72Q8NBR9 251 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 OR8A1Q8NGG7 326 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 LINC01006Q8NI28 216 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 UBALD1Q8TB05 177 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 LEAP2Q969E1 77 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TOMM6Q96B49 74 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 C2orf50Q96LR7 162 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 PRELID3AQ96N28 172 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 HIST1H4GQ99525 98 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TM2D3Q9BRN9 247 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM243Q9BU79 118 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 RNF126Q9BV68 326 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 AGPAT4-IT1Q9H0P7 198 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 SLC35B3Q9H1N7 401 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 C11orf1Q9H5F2 150 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM14BQ9NUH8 114 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 DPM3Q9P2X0 92 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 CACFD1Q9UGQ2 172 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 SERP1Q9Y6X1 66 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 DNAH17Q9UFH2 4485 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 HYDINQ4G0P3 5121 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 DNAH11Q96DT5 4516 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 HECTD4Q9Y4D8 3996 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 RYR3Q15413 4870 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 ALMS1Q8TCU4 4167 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 NBEAL2Q6ZNJ1 2754 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 DNAH5Q8TE73 4624 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3OR16-13A0A075B7E8 117 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3OR16-10A0A075B7F0 116 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 A0A087WWC5 75 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 TRBV7-6A0A0J9YX20 115 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 MUC21A0A140T8X8 626 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 C7orf66A4D0T2 115 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 RBAKDNA6NC62 111 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CRYM-AS1A6NIL9 109 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLL5B9A064 214 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 UMAD1C9J7I0 102 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 H3BT86 120 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 H3BUX3 64 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 M0R2P5 195 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 SDCBPO00560 298 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 PSPHP1O15172 72 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CREBL2O60519 120 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGKV1D-33P01593 117 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGKV1-33P01594 117 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGKV1-5P01602 117 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3-7P01780 117 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 SAA1P0DJI8 122 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CRYGAP11844 174 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 HLA-DRB4P13762 266 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CRISP2P16562 243 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 MDKP21741 143 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 IL3RAP26951 378 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 ASIPP42127 132 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 SYNJ2BPP57105 145 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 KRTDAPP60985 99 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 RPL23P62829 140 aaKnown RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 BLCAPP62952 87 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 HBBP68871 147 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 PMCHL1Q16048 86 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 LGALS9BQ3B8N2 356 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 ETDBQ3ZM63 59 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 MPV17L2Q567V2 206 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 COA6Q5JTJ3 125 aaKnown RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 BVES-AS1Q5T3Y7 98 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 MIC13Q5XKP0 118 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 LCA10Q71F78 164 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 RPP25LQ8N5L8 163 aaKnown RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 NKAPP1Q8N9T2 125 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CMTM2Q8TAZ6 248 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM167AQ8TBQ9 72 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 PPDPFLQ8WWR9 84 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CHCHD10Q8WYQ3 142 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 H1FXQ92522 213 aaKnown RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM218AQ96MZ4 157 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 DSCR8Q96T75 97 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CHCHD5Q9BSY4 110 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 SLC25A22Q9H936 323 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 CCL28Q9NRJ3 127 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 TNFRSF19Q9NS68 423 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 XCL2Q9UBD3 114 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 TP73-AS1Q9UF72 201 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 KLK5Q9Y337 293 aaPredicted RBP1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 HLA-DRB4X5D2U9 266 aa1.29□□□□□ -2.2
CBX3P4-201ENST00000538909 RYR2Q92736 4967 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLV11-55A0A075B6I3 123 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV6-1A0A0B4J1U7 121 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3-72A0A0B4J1Y9 119 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV3A0A0B4J244 114 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 CLPSL1A2RUU4 121 aa1.28□□□□□ -2.2
CBX3P4-201ENST00000538909 EPM2AB3EWF7 344 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms